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Lebedeva LA, Yakovlev KV, Kozlov EN, Schedl P, Deshpande G, Shidlovskii YV. Transcriptional quiescence in primordial germ cells. Crit Rev Biochem Mol Biol. 2018 ;53(6):579-595.
Erokhin M, Elizar'ev P, Parshikov A, Schedl P, Georgiev P, Chetverina D. Transcriptional read-through is not sufficient to induce an epigenetic switch in the silencing activity of Polycomb response elements. Proc Natl Acad Sci U S A. 2015 ;112(48):14930-5.
Adolfsen KJ, Chou WKang, Brynildsen MP. Transcriptional Regulation Contributes to Prioritized Detoxification of Hydrogen Peroxide over Nitric Oxide. J Bacteriol. 2019 ;201(14).
Momen-Roknabadi A, Di Talia S, Wieschaus E. Transcriptional Timers Regulating Mitosis in Early Drosophila Embryos. Cell Rep. 2016 ;16(11):2793-2801.
Wong M-C, Kennedy WP, Schwarzbauer JE. Transcriptionally regulated cell adhesion network dictates distal tip cell directionality. Dev Dyn. 2014 ;243(8):999-1010.
Kaletsky R, Yao V, Williams A, Runnels AM, Tadych A, Zhou S, et al. Transcriptome analysis of adult Caenorhabditis elegans cells reveals tissue-specific gene and isoform expression. PLoS Genet. 2018 ;14(8):e1007559.
Chen X, Du Y, Broussard GJoey, Kislin M, Yuede CM, Zhang S, et al. Transcriptomic mapping uncovers Purkinje neuron plasticity driving learning. Nature. 2022 ;605(7911):722-727.
Heck BW, Devenport D. Trans-endocytosis of Planar Cell Polarity Complexes during Cell Division. Curr Biol. 2017 ;27(23):3725-3733.e4.
French H, Pitre E, Oade MS, Elshina E, Bisht K, King A, et al. Transient RNA structures cause aberrant influenza virus replication and innate immune activation. Sci Adv. 2022 ;8(36):eabp8655.
Aw WYih, Heck BW, Joyce B, Devenport D. Transient Tissue-Scale Deformation Coordinates Alignment of Planar Cell Polarity Junctions in the Mammalian Skin. Curr Biol. 2016 ;26(16):2090-100.
Thawani A, Rale MJ, Coudray N, Bhabha G, Stone HA, Shaevitz JW, et al. The transition state and regulation of γ-TuRC-mediated microtubule nucleation revealed by single molecule microscopy. Elife. 2020 ;9.
Wan X, A Link J, Brynildsen MP. Translational Fusion to Hmp Improves Heterologous Protein Expression. Microorganisms. 2022 ;10(2).
Jaslove JM, Goodwin K, Sundarakrishnan A, Spurlin JW, Mao S, Košmrlj A, et al.. Transmural pressure signals through retinoic acid to regulate lung branching. Development. 2022 ;149(2).
Kennedy MA, Hofstadter WA, Cristea IM. TRANSPIRE: A Computational Pipeline to Elucidate Intracellular Protein Movements from Spatial Proteomics Data Sets. J Am Soc Mass Spectrom. 2020 ;31(7):1422-1439.
Mattingly HH, Chen JJ, Arur S, Shvartsman SY. A Transport Model for Estimating the Time Course of ERK Activation in the C. elegans Germline. Biophys J. 2015 ;109(11):2436-45.
Balo AR, Caruso A, Tao L, Tantillo DJ, Seyedsayamdost MR, R Britt D. Trapping a cross-linked lysine-tryptophan radical in the catalytic cycle of the radical SAM enzyme SuiB. Proc Natl Acad Sci U S A. 2021 ;118(21).
Rajeshkumar NV, Yabuuchi S, Pai SG, De Oliveira E, Kamphorst JJ, Rabinowitz JD, et al. Treatment of Pancreatic Cancer Patient-Derived Xenograft Panel with Metabolic Inhibitors Reveals Efficacy of Phenformin. Clin Cancer Res. 2017 ;23(18):5639-5647.
Spadazzi C, Mercatali L, Esposito M, Wei Y, Liverani C, De Vita A, et al. Trefoil factor-1 upregulation in estrogen-receptor positive breast cancer correlates with an increased risk of bone metastasis. Bone. 2021 ;144:115775.
Kennedy MA, Tyl MD, Betsinger CN, Federspiel JD, Sheng X, Arbuckle JH, et al. A TRUSTED targeted mass spectrometry assay for pan-herpesvirus protein detection. Cell Rep. 2022 ;39(6):110810.
García-Cañaveras JC, Chen L, Rabinowitz JD. The Tumor Metabolic Microenvironment: Lessons from Lactate. Cancer Res. 2019 ;79(13):3155-3162.
Meng J, Jiang Y-Z, Zhao S, Tao Y, Zhang T, Wang X, et al. Tumor-derived Jagged1 promotes cancer progression through immune evasion. Cell Rep. 2022 ;38(10):110492.
Nogalski MT, Solovyov A, Kulkarni AS, Desai N, Oberstein A, Levine AJ, et al. A tumor-specific endogenous repetitive element is induced by herpesviruses. Nat Commun. 2019 ;10(1):90.
Zheng H, Li W, Kang Y. Tumor-Stroma Interactions in Bone Metastasis: Molecular Mechanisms and Therapeutic Implications. Cold Spring Harb Symp Quant Biol. 2016 ;81:151-161.
Boulogne F, Ingremeau F, Limat L, Stone HA. Tuning the Receding Contact Angle on Hydrogels by Addition of Particles. Langmuir. 2016 ;32(22):5573-9.
Lu Y, Xie S, Zhang W, Zhang C, Gao C, Sun Q, et al. Twa1/Gid8 is a β-catenin nuclear retention factor in Wnt signaling and colorectal tumorigenesis. Cell Res. 2017 ;27(12):1422-1440.