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Przytycki PF, Singh M. Differential Allele-Specific Expression Uncovers Breast Cancer Genes Dysregulated by Cis Noncoding Mutations. Cell Syst. 2020 ;10(2):193-203.e4.
Cleard F, Wolle D, Taverner AM, Aoki T, Deshpande G, Andolfatto P, et al. Different Evolutionary Strategies To Conserve Chromatin Boundary Function in the Bithorax Complex. Genetics. 2017 ;205(2):589-603.
Gaska JM, Balev M, Ding Q, Heller B, Ploss A. Differences across cyclophilin A orthologs contribute to the host range restriction of hepatitis C virus. Elife. 2019 ;8.
Sonnenburg ED, Smits SA, Tikhonov M, Higginbottom SK, Wingreen NS, Sonnenburg JL. Diet-induced extinctions in the gut microbiota compound over generations. Nature. 2016 ;529(7585):212-5.
Guan D, Xiong Y, Borck PC, Jang C, Doulias P-T, Papazyan R, et al. Diet-Induced Circadian Enhancer Remodeling Synchronizes Opposing Hepatic Lipid Metabolic Processes. Cell. 2018 ;174(4):831-842.e12.
Zhao S, Jang C, Liu J, Uehara K, Gilbert M, Izzo L, et al. Dietary fructose feeds hepatic lipogenesis via microbiota-derived acetate. Nature. 2020 ;579(7800):586-591.
Berg RA, Morgan RW, Reeder RW, Ahmed T, Bell MJ, Bishop R, et al. Diastolic Blood Pressure Threshold During Pediatric Cardiopulmonary Resuscitation and Survival Outcomes: A Multicenter Validation Study. Crit Care Med. 2023 ;51(1):91-102.
Manceau M, Domingues VS, Mallarino R, Hoekstra HE. The developmental role of Agouti in color pattern evolution. Science. 2011 ;331(6020):1062-5.
Kapheim KM, Jones BM, Pan H, Li C, Harpur BA, Kent CF, et al. Developmental plasticity shapes social traits and selection in a facultatively eusocial bee. Proc Natl Acad Sci U S A. 2020 ;117(24):13615-13625.
Lim AIng, Verrier T, Vosshenrich CAj, Di Santo JP. Developmental options and functional plasticity of innate lymphoid cells. Curr Opin Immunol. 2017 ;44:61-68.
Mallarino R, Henegar C, Mirasierra M, Manceau M, Schradin C, Vallejo M, et al. Developmental mechanisms of stripe patterns in rodents. Nature. 2016 ;539(7630):518-523.
Mallarino R, Hoekstra HE, Manceau M. Developmental genetics in emerging rodent models: case studies and perspectives. Curr Opin Genet Dev. 2016 ;39:182-186.
Miller LC, O'Loughlin CT, Zhang Z, Siryaporn A, Silpe JE, Bassler BL, et al. Development of potent inhibitors of pyocyanin production in Pseudomonas aeruginosa. J Med Chem. 2015 ;58(3):1298-306.
Henry TC, Brynildsen MP. Development of Persister-FACSeq: a method to massively parallelize quantification of persister physiology and its heterogeneity. Sci Rep. 2016 ;6:25100.
Carrasco-López C, Zhao EM, Gil AA, Alam N, Toettcher JE, Avalos JL. Development of light-responsive protein binding in the monobody non-immunoglobulin scaffold. Nat Commun. 2020 ;11(1):4045.
Goyal R, Vega ME, Pastino AK, Singh S, Guvendiren M, Kohn J, et al. Development of hybrid scaffolds with natural extracellular matrix deposited within synthetic polymeric fibers. J Biomed Mater Res A. 2017 ;105(8):2162-2170.
Wang R, Zheng J, Shao X, Ishii Y, Roy A, Bello A, et al. Development of a prognostic composite cytokine signature based on the correlation with nivolumab clearance: translational PK/PD analysis in patients with renal cell carcinoma. J Immunother Cancer. 2019 ;7(1):348.
Zhao Z, Tian D, McBride CS. Development of a pan-neuronal genetic driver in mosquitoes. Cell Rep Methods. 2021 ;1(3).
Li W, Shen M, Jiang Y-Z, Zhang R, Zheng H, Wei Y, et al. Deubiquitinase USP20 promotes breast cancer metastasis by stabilizing SNAI2. Genes Dev. 2020 ;34(19-20):1310-1315.
Greco TM, Guise AJ, Cristea IM. Determining the Composition and Stability of Protein Complexes Using an Integrated Label-Free and Stable Isotope Labeling Strategy. Methods Mol Biol. 2016 ;1410:39-63.
Fujioka M, Mistry H, Schedl P, Jaynes JB. Determinants of Chromosome Architecture: Insulator Pairing in cis and in trans. PLoS Genet. 2016 ;12(2):e1005889.
Ke X, Miller LC, Bassler BL. Determinants governing ligand specificity of the Vibrio harveyi LuxN quorum-sensing receptor. Mol Microbiol. 2015 ;95(1):127-42.
Tuttle RN, Demko AM, Patin NV, Kapono CA, Donia MS, Dorrestein P, et al. Detection of Natural Products and Their Producers in Ocean Sediments. Appl Environ Microbiol. 2019 ;85(8).
Schwartz G, Harris R, Shrom D, Berry MJ. Detection and prediction of periodic patterns by the retina. Nat Neurosci. 2007 ;10(5):552-4.
Metsky HC, Welch NL, Pillai PP, Haradhvala NJ, Rumker L, Mantena S, et al. Designing sensitive viral diagnostics with machine learning. Nat Biotechnol. 2022 ;40(7):1123-1131.