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Barrio-Real L, Lopez-Haber C, Casado-Medrano V, Goglia AG, Toettcher JE, Caloca MJ, et al. P-Rex1 is dispensable for Erk activation and mitogenesis in breast cancer. Oncotarget. 2018 ;9(47):28612-28624.
Yan J, Cirincione A, Adamson B. Prime Editing: Precision Genome Editing by Reverse Transcription. Mol Cell. 2020 ;77(2):210-212.
Zhou J, Troyanskaya OG. Probabilistic modelling of chromatin code landscape reveals functional diversity of enhancer-like chromatin states. Nat Commun. 2016 ;7:10528.
Hao W, Song M, Storey JD. Probabilistic models of genetic variation in structured populations applied to global human studies. Bioinformatics. 2016 ;32(5):713-21.
Bracha D, Walls MT, Brangwynne CP. Probing and engineering liquid-phase organelles. Nat Biotechnol. 2019 ;37(12):1435-1445.
Ng W-L, Wei Y, Perez LJ, Cong J, Long T, Koch M, et al. Probing bacterial transmembrane histidine kinase receptor-ligand interactions with natural and synthetic molecules. Proc Natl Acad Sci U S A. 2010 ;107(12):5575-80.
Li W, Kang Y. Probing the Fifty Shades of EMT in Metastasis. Trends Cancer. 2016 ;2(2):65-67.
Arora N, Alsous JImran, Guggenheim JW, Mak M, Munera J, Wells JM, et al. A process engineering approach to increase organoid yield. Development. 2017 ;144(6):1128-1136.
Tilghman SM. Profile of Bruce M. Alberts, 2016 Lasker-Koshland Special Achievement Award in Medical Science Awardee. Proc Natl Acad Sci U S A. 2017 ;114(7):1439-1441.
Freije CA, Myhrvold C, Boehm CK, Lin AE, Welch NL, Carter A, et al. Programmable Inhibition and Detection of RNA Viruses Using Cas13. Mol Cell. 2019 ;76(5):826-837.e11.
Omenn GS, Lane L, Overall CM, Paik Y-K, Cristea IM, Corrales FJ, et al. Progress Identifying and Analyzing the Human Proteome: 2021 Metrics from the HUPO Human Proteome Project. J Proteome Res. 2021 ;20(12):5227-5240.
Kim CK, Miri A, Leung LC, Berndt A, Mourrain P, Tank DW, et al. Prolonged, brain-wide expression of nuclear-localized GCaMP3 for functional circuit mapping. Front Neural Circuits. 2014 ;8:138.
Stevens AJ, Sekar G, Shah NH, Mostafavi AZ, Cowburn D, Muir TW. A promiscuous split intein with expanded protein engineering applications. Proc Natl Acad Sci U S A. 2017 ;114(32):8538-8543.
Toettcher JE, Voigt CA, Weiner OD, Lim WA. The promise of optogenetics in cell biology: interrogating molecular circuits in space and time. Nat Methods. 2011 ;8(1):35-8.
Siddiqui AM, Brunner R, Harris GM, Miller ALee, Waletzki BE, Schmeichel AM, et al. Promoting Neuronal Outgrowth Using Ridged Scaffolds Coated with Extracellular Matrix Proteins. Biomedicines. 2021 ;9(5).
Treen N, Shimobayashi SF, Eeftens J, Brangwynne CP, Levine M. Properties of repression condensates in living Ciona embryos. Nat Commun. 2021 ;12(1):1561.
Hennacy JH, Jonikas MC. Prospects for Engineering Biophysical CO Concentrating Mechanisms into Land Plants to Enhance Yields. Annu Rev Plant Biol. 2020 ;71:461-485.
Douam F, Fusil F, Enguehard M, Dib L, Nadalin F, Schwaller L, et al. A protein coevolution method uncovers critical features of the Hepatitis C Virus fusion mechanism. PLoS Pathog. 2018 ;14(3):e1006908.
Digianantonio KM, Hecht MH. A protein constructed de novo enables cell growth by altering gene regulation. Proc Natl Acad Sci U S A. 2016 ;113(9):2400-5.
Do T, A Link J. Protein Engineering in Ribosomally Synthesized and Post-translationally Modified Peptides (RiPPs). Biochemistry. 2022 ;.
Thompson RE, Stevens AJ, Muir TW. Protein engineering through tandem transamidation. Nat Chem. 2019 ;11(8):737-743.
Taylor IR, Murray-Nerger LA, Greco TM, Liu D, Cristea IM, Bassler BL. Protein Interaction Networks of Catalytically Active and Catalytically Inactive PqsE in Pseudomonas aeruginosa. mBio. 2022 ;:e0155922.
Durán AHernández, Greco TM, Vollmer B, Cristea IM, Grünewald K, Topf M. Protein interactions and consensus clustering analysis uncover insights into herpesvirus virion structure and function relationships. PLoS Biol. 2019 ;17(6):e3000316.
Rowland EA, Snowden CK, Cristea IM. Protein lipoylation: an evolutionarily conserved metabolic regulator of health and disease. Curr Opin Chem Biol. 2018 ;42:76-85.
Dine E, Gil AA, Uribe G, Brangwynne CP, Toettcher JE. Protein Phase Separation Provides Long-Term Memory of Transient Spatial Stimuli. Cell Syst. 2018 ;6(6):655-663.e5.