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Author Title [ Year(Desc)]
2011
Toettcher JE, Voigt CA, Weiner OD, Lim WA. The promise of optogenetics in cell biology: interrogating molecular circuits in space and time. Nat Methods. 2011 ;8(1):35-8.
Toettcher JE, Apgar JF, Castillo AR, Tidor B, White JK. Recycling circuit simulation techniques for mass-action biochemical kinetics. In Advanced Simulation and Verification of Electronic and Biological Systems. 2011. p. 115-136.
Kopec CD, Bowers AC, Pai S, Brody CD. Semi-automated atlas-based analysis of brain histological sections. J Neurosci Methods. 2011 ;196(1):12-9.
Ng W-L, Perez LJ, Wei Y, Kraml C, Semmelhack MF, Bassler BL. Signal production and detection specificity in Vibrio CqsA/CqsS quorum-sensing systems. Mol Microbiol. 2011 ;79(6):1407-17.
He W, Brumos J, Li H, Ji Y, Ke M, Gong X, et al. A small-molecule screen identifies L-kynurenine as a competitive inhibitor of TAA1/TAR activity in ethylene-directed auxin biosynthesis and root growth in Arabidopsis. Plant Cell. 2011 ;23(11):3944-60.
Chen G, Swem LR, Swem DL, Stauff DL, O'Loughlin CT, Jeffrey PD, et al. A strategy for antagonizing quorum sensing. Mol Cell. 2011 ;42(2):199-209.
Seyedsayamdost MR, Traxler MF, Zheng S-L, Kolter R, Clardy J. Structure and biosynthesis of amychelin, an unusual mixed-ligand siderophore from Amycolatopsis sp. AA4. J Am Chem Soc. 2011 ;133(30):11434-7.
Lu F, Li S, Jiang Y, Jiang J, Fan H, Lu G, et al. Structure and mechanism of the uracil transporter UraA. Nature. 2011 ;472(7342):243-6.
Mallarino R, Grant PR, B Grant R, Herrel A, Kuo WP, Abzhanov A. Two developmental modules establish 3D beak-shape variation in Darwin's finches. Proc Natl Acad Sci U S A. 2011 ;108(10):4057-62.
Brown JE, McBride CS, Johnson P, Ritchie S, Paupy C, Bossin H, et al. Worldwide patterns of genetic differentiation imply multiple 'domestications' of Aedes aegypti, a major vector of human diseases. Proc Biol Sci. 2011 ;278(1717):2446-54.
2012
Wühr M, Haas W, McAlister GC, Peshkin L, Rad R, Kirschner MW, et al.. Accurate multiplexed proteomics at the MS2 level using the complement reporter ion cluster. Anal Chem. 2012 ;84(21):9214-21.
Rutherford ST, Bassler BL. Bacterial quorum sensing: its role in virulence and possibilities for its control. Cold Spring Harb Perspect Med. 2012 ;2(11).
Sigoillot FD, Lyman S, Huckins JF, Adamson B, Chung E, Quattrochi B, et al. A bioinformatics method identifies prominent off-targeted transcripts in RNAi screens. Nat Methods. 2012 ;9(4):363-6.
Ng W-L, Perez L, Cong J, Semmelhack MF, Bassler BL. Broad spectrum pro-quorum-sensing molecules as inhibitors of virulence in vibrios. PLoS Pathog. 2012 ;8(6):e1002767.
Mallarino R, Campàs O, Fritz JA, Burns KJ, Weeks OG, Brenner MP, et al.. Closely related bird species demonstrate flexibility between beak morphology and underlying developmental programs. Proc Natl Acad Sci U S A. 2012 ;109(40):16222-7.
Sun L, Zeng X, Yan C, Sun X, Gong X, Rao Y, et al. Crystal structure of a bacterial homologue of glucose transporters GLUT1-4. Nature. 2012 ;490(7420):361-6.
Zhang X, Ren W, DeCaen P, Yan C, Tao X, Tang L, et al. Crystal structure of an orthologue of the NaChBac voltage-gated sodium channel. Nature. 2012 ;486(7401):130-4.
Sugihara J, Sun L, Yan N, H Kaback R. Dynamics of the L-fucose/H+ symporter revealed by fluorescence spectroscopy. Proc Natl Acad Sci U S A. 2012 ;109(37):14847-51.
Adamson B, Smogorzewska A, Sigoillot FD, King RW, Elledge SJ. A genome-wide homologous recombination screen identifies the RNA-binding protein RBMX as a component of the DNA-damage response. Nat Cell Biol. 2012 ;14(3):318-28.
Han Y, Whitney G, Donovan J, Korennykh A. Innate immune messenger 2-5A tethers human RNase L into active high-order complexes. Cell Rep. 2012 ;2(4):902-13.
Wei Y, Ng W-L, Cong J, Bassler BL. Ligand and antagonist driven regulation of the Vibrio cholerae quorum-sensing receptor CqsS. Mol Microbiol. 2012 ;83(6):1095-108.
Schwartz G, Macke J, Amodei D, Tang H, Berry MJ. Low error discrimination using a correlated population code. J Neurophysiol. 2012 ;108(4):1069-88.
Marre O, Amodei D, Deshmukh N, Sadeghi K, Soo F, Holy TE, et al. Mapping a complete neural population in the retina. J Neurosci. 2012 ;32(43):14859-73.
Seyedsayamdost MR, Cleto S, Carr G, Vlamakis H, Vieira MJoão, Kolter R, et al.. Mixing and matching siderophore clusters: structure and biosynthesis of serratiochelins from Serratia sp. V4. J Am Chem Soc. 2012 ;134(33):13550-3.
Xie T, Ren R, Zhang Y-yuan, Pang Y, Yan C, Gong X, et al. Molecular mechanism for inhibition of a critical component in the Arabidopsis thaliana abscisic acid signal transduction pathways, SnRK2.6, by protein phosphatase ABI1. J Biol Chem. 2012 ;287(1):794-802.