Publications

Search Publications
Export 91 results:
[ Author(Desc)] Title Year
Filters: Keyword is Models, Biological  [Clear All Filters]
A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 
N
Nelson CM, Gleghorn JP, Pang M-F, Jaslove JM, Goodwin K, Varner VD, et al. Microfluidic chest cavities reveal that transmural pressure controls the rate of lung development. Development. 2017 ;144(23):4328-4335.
Nerger BA, Siedlik MJ, Nelson CM. Microfabricated tissues for investigating traction forces involved in cell migration and tissue morphogenesis. Cell Mol Life Sci. 2017 ;74(10):1819-1834.
Nofal M, Zhang K, Han S, Rabinowitz JD. mTOR Inhibition Restores Amino Acid Balance in Cells Dependent on Catabolism of Extracellular Protein. Mol Cell. 2017 ;67(6):936-946.e5.
Noorbakhsh J, Schwab DJ, Sgro AE, Gregor T, Mehta P. Modeling oscillations and spiral waves in Dictyostelium populations. Phys Rev E Stat Nonlin Soft Matter Phys. 2015 ;91(6):062711.
O
Okuda S, Sherman DJ, Silhavy TJ, Ruiz N, Kahne D. Lipopolysaccharide transport and assembly at the outer membrane: the PEZ model. Nat Rev Microbiol. 2016 ;14(6):337-45.
Osterfield M, Berg CA, Shvartsman SY. Epithelial Patterning, Morphogenesis, and Evolution: Drosophila Eggshell as a Model. Dev Cell. 2017 ;41(4):337-348.
Ouzounov N, Nguyen JP, Bratton BP, Jacobowitz D, Gitai Z, Shaevitz JW. MreB Orientation Correlates with Cell Diameter in Escherichia coli. Biophys J. 2016 ;111(5):1035-43.
P
Pastino AK, Greco TM, Mathias RA, Cristea IM, Schwarzbauer JE. Stimulatory effects of advanced glycation endproducts (AGEs) on fibronectin matrix assembly. Matrix Biol. 2017 ;59:39-53.
Patel AL, Shvartsman SY. Outstanding questions in developmental ERK signaling. Development. 2018 ;145(14).
Persat A, Inclan YF, Engel JN, Stone HA, Gitai Z. Type IV pili mechanochemically regulate virulence factors in Pseudomonas aeruginosa. Proc Natl Acad Sci U S A. 2015 ;112(24):7563-8.
Pierre A, Sallé J, Wühr M, Minc N. Generic Theoretical Models to Predict Division Patterns of Cleaving Embryos. Dev Cell. 2016 ;39(6):667-682.
Piotrowski-Daspit AS, Nerger BA, Wolf AE, Sundaresan S, Nelson CM. Dynamics of Tissue-Induced Alignment of Fibrous Extracellular Matrix. Biophys J. 2017 ;113(3):702-713.
Posfai A, Taillefumier T, Wingreen NS. Metabolic Trade-Offs Promote Diversity in a Model Ecosystem. Phys Rev Lett. 2017 ;118(2):028103.
R
Rale MJ, Kadzik RS, Petry S. Phase Transitioning the Centrosome into a Microtubule Nucleator. Biochemistry. 2018 ;57(1):30-37.
Robinson JL, Brynildsen MP. Discovery and dissection of metabolic oscillations in the microaerobic nitric oxide response network of Escherichia coli. Proc Natl Acad Sci U S A. 2016 ;113(12):E1757-66.
Robinson JL, Jaslove JM, Murawski AM, Fazen CH, Brynildsen MP. An integrated network analysis reveals that nitric oxide reductase prevents metabolic cycling of nitric oxide by Pseudomonas aeruginosa. Metab Eng. 2017 ;41:67-81.
Rubinstein BY, Mattingly HH, Berezhkovskii AM, Shvartsman SY. Long-term dynamics of multisite phosphorylation. Mol Biol Cell. 2016 ;27(14):2331-40.
Rutherford ST, van Kessel JC, Shao Y, Bassler BL. AphA and LuxR/HapR reciprocally control quorum sensing in vibrios. Genes Dev. 2011 ;25(4):397-408.
S
Sabass B, Koch MD, Liu G, Stone HA, Shaevitz JW. Force generation by groups of migrating bacteria. Proc Natl Acad Sci U S A. 2017 ;114(28):7266-7271.
Schluter J, Nadell CD, Bassler BL, Foster KR. Adhesion as a weapon in microbial competition. ISME J. 2015 ;9(1):139-49.
Seyedsayamdost MR, Case RJ, Kolter R, Clardy J. The Jekyll-and-Hyde chemistry of Phaeobacter gallaeciensis. Nat Chem. 2011 ;3(4):331-5.
Shi Z, Graber ZT, Baumgart T, Stone HA, Cohen AE. Cell Membranes Resist Flow. Cell. 2018 ;175(7):1769-1779.e13.
Siedlik MJ, Manivannan S, Kevrekidis IG, Nelson CM. Cell Division Induces and Switches Coherent Angular Motion within Bounded Cellular Collectives. Biophys J. 2017 ;112(11):2419-2427.
Simsek ANihat, Braeutigam A, Koch MD, Shaevitz JW, Huang Y, Gompper G, et al. Substrate-rigidity dependent migration of an idealized twitching bacterium. Soft Matter. 2019 ;15(30):6224-6236.
Soltes GR, Martin NR, Park E, Sutterlin HA, Silhavy TJ. Distinctive Roles for Periplasmic Proteases in the Maintenance of Essential Outer Membrane Protein Assembly. J Bacteriol. 2017 ;199(20).