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2016
Berezhkovskii AM, Shvartsman SY. Diffusive flux in a model of stochastically gated oxygen transport in insect respiration. J Chem Phys. 2016 ;144(20):204101.
Robinson JL, Brynildsen MP. Discovery and dissection of metabolic oscillations in the microaerobic nitric oxide response network of Escherichia coli. Proc Natl Acad Sci U S A. 2016 ;113(12):E1757-66.
Pierre A, Sallé J, Wühr M, Minc N. Generic Theoretical Models to Predict Division Patterns of Cleaving Embryos. Dev Cell. 2016 ;39(6):667-682.
Budayeva HG, Rowland EA, Cristea IM. Intricate Roles of Mammalian Sirtuins in Defense against Viral Pathogens. J Virol. 2016 ;90(1):5-8.
Okuda S, Sherman DJ, Silhavy TJ, Ruiz N, Kahne D. Lipopolysaccharide transport and assembly at the outer membrane: the PEZ model. Nat Rev Microbiol. 2016 ;14(6):337-45.
Rubinstein BY, Mattingly HH, Berezhkovskii AM, Shvartsman SY. Long-term dynamics of multisite phosphorylation. Mol Biol Cell. 2016 ;27(14):2331-40.
Wilson MZ, Wang R, Gitai Z, Seyedsayamdost MR. Mode of action and resistance studies unveil new roles for tropodithietic acid as an anticancer agent and the γ-glutamyl cycle as a proton sink. Proc Natl Acad Sci U S A. 2016 ;113(6):1630-5.
Ouzounov N, Nguyen JP, Bratton BP, Jacobowitz D, Gitai Z, Shaevitz JW. MreB Orientation Correlates with Cell Diameter in Escherichia coli. Biophys J. 2016 ;111(5):1035-43.
Navis A, Nelson CM. Pulling together: Tissue-generated forces that drive lumen morphogenesis. Semin Cell Dev Biol. 2016 ;55:139-47.
Misra M, Audoly B, Kevrekidis IG, Shvartsman SY. Shape Transformations of Epithelial Shells. Biophys J. 2016 ;110(7):1670-1678.
Chen D, Aw WYih, Devenport D, Torquato S. Structural Characterization and Statistical-Mechanical Model of Epidermal Patterns. Biophys J. 2016 ;111(11):2534-2545.
Devenport D. Tissue morphodynamics: Translating planar polarity cues into polarized cell behaviors. Semin Cell Dev Biol. 2016 ;55:99-110.
2015
LaRue KM, Clemens J, Berman GJ, Murthy M. Acoustic duetting in Drosophila virilis relies on the integration of auditory and tactile signals. Elife. 2015 ;4.
Schluter J, Nadell CD, Bassler BL, Foster KR. Adhesion as a weapon in microbial competition. ISME J. 2015 ;9(1):139-49.
Alfaro-Aco R, Petry S. Building the Microtubule Cytoskeleton Piece by Piece. J Biol Chem. 2015 ;290(28):17154-62.
Thutupalli S, Sun M, Bunyak F, Palaniappan K, Shaevitz JW. Directional reversals enable Myxococcus xanthus cells to produce collective one-dimensional streams during fruiting-body formation. J R Soc Interface. 2015 ;12(109):20150049.
Gjorevski N, Piotrowski AS, Varner VD, Nelson CM. Dynamic tensile forces drive collective cell migration through three-dimensional extracellular matrices. Sci Rep. 2015 ;5:11458.
Berezhkovskii AM, Shvartsman SY. Dynamics of gradient formation by intracellular shuttling. J Chem Phys. 2015 ;143(7):074116.
Lim B, Dsilva CJ, Levario TJ, Lu H, Schüpbach T, Kevrekidis IG, et al.. Dynamics of Inductive ERK Signaling in the Drosophila Embryo. Curr Biol. 2015 ;25(13):1784-90.
Borenstein DBruce, Ringel P, Basler M, Wingreen NS. Established Microbial Colonies Can Survive Type VI Secretion Assault. PLoS Comput Biol. 2015 ;11(10):e1004520.
Murisic N, Hakim V, Kevrekidis IG, Shvartsman SY, Audoly B. From discrete to continuum models of three-dimensional deformations in epithelial sheets. Biophys J. 2015 ;109(1):154-63.
Lembong J, Sabass B, Sun B, Rogers ME, Stone HA. Mechanics regulates ATP-stimulated collective calcium response in fibroblast cells. J R Soc Interface. 2015 ;12(108):20150140.
Noorbakhsh J, Schwab DJ, Sgro AE, Gregor T, Mehta P. Modeling oscillations and spiral waves in Dictyostelium populations. Phys Rev E Stat Nonlin Soft Matter Phys. 2015 ;91(6):062711.
Konovalova A, Silhavy TJ. Outer membrane lipoprotein biogenesis: Lol is not the end. Philos Trans R Soc Lond B Biol Sci. 2015 ;370(1679).
Jindal GA, Goyal Y, Burdine RD, Rauen KA, Shvartsman SY. RASopathies: unraveling mechanisms with animal models. Dis Model Mech. 2015 ;8(8):769-82.