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C
Chekan JR, Koos JD, Zong C, Maksimov MO, A Link J, Nair SK. Structure of the Lasso Peptide Isopeptidase Identifies a Topology for Processing Threaded Substrates. J Am Chem Soc. 2016 ;138(50):16452-16458.
Chen KM, Cofer EM, Zhou J, Troyanskaya OG. Selene: a PyTorch-based deep learning library for sequence data. Nat Methods. 2019 ;16(4):315-318.
Chen X, Schauder S, Potier N, Van Dorsselaer A, Pelczer I, Bassler BL, et al. Structural identification of a bacterial quorum-sensing signal containing boron. Nature. 2002 ;415(6871):545-9.
Chen D, Aw WYih, Devenport D, Torquato S. Structural Characterization and Statistical-Mechanical Model of Epidermal Patterns. Biophys J. 2016 ;111(11):2534-2545.
Chen G, Swem LR, Swem DL, Stauff DL, O'Loughlin CT, Jeffrey PD, et al. A strategy for antagonizing quorum sensing. Mol Cell. 2011 ;42(2):199-209.
Chen C-F, Pohl TJ, Chan A, Slocum JS, Zakian VA. Saccharomyces cerevisiae Centromere RNA Is Negatively Regulated by Cbf1 and Its Unscheduled Synthesis Impacts CenH3 Binding. Genetics. 2019 ;.
Choi J, Rajagopal A, Xu Y-F, Rabinowitz JD, O'Shea EK. A systematic genetic screen for genes involved in sensing inorganic phosphate availability in Saccharomyces cerevisiae. PLoS One. 2017 ;12(5):e0176085.
Chou WKang, Vaikunthan M, Schröder HV, A Link J, Kim H, Brynildsen MP. Synergy Screening Identifies a Compound That Selectively Enhances the Antibacterial Activity of Nitric Oxide. Front Bioeng Biotechnol. 2020 ;8:1001.
Chuang SK, Vrla GD, Fröhlich KS, Gitai Z. Surface association sensitizes Pseudomonas aeruginosa to quorum sensing. Nat Commun. 2019 ;10(1):4118.
Chung NChristophe, Storey JD. Statistical significance of variables driving systematic variation in high-dimensional data. Bioinformatics. 2015 ;31(4):545-54.
Coen P, Murthy M. Singing on the fly: sensorimotor integration and acoustic communication in Drosophila. Curr Opin Neurobiol. 2016 ;38:38-45.
Coen P, Xie M, Clemens J, Murthy M. Sensorimotor Transformations Underlying Variability in Song Intensity during Drosophila Courtship. Neuron. 2016 ;89(3):629-44.
Cosgrove MS, Bever K, Avalos JL, Muhammad S, Zhang X, Wolberger C. The structural basis of sirtuin substrate affinity. Biochemistry. 2006 ;45(24):7511-21.
D
Dang S, Sun L, Huang Y, Lu F, Liu Y, Gong H, et al. Structure of a fucose transporter in an outward-open conformation. Nature. 2010 ;467(7316):734-8.
Davis KM, Schramma KR, Hansen WA, Bacik JP, Khare SD, Seyedsayamdost MR, et al. Structures of the peptide-modifying radical SAM enzyme SuiB elucidate the basis of substrate recognition. Proc Natl Acad Sci U S A. 2017 ;114(39):10420-10425.
DeCandia AL, Cassidy KA, Stahler DR, Stahler EA, vonHoldt BM. Social environment and genetics underlie body site-specific microbiomes of Yellowstone National Park gray wolves (). Ecol Evol. 2021 ;11(14):9472-9488.
DeCandia AL, Schrom EC, Brandell EE, Stahler DR, vonHoldt BM. Sarcoptic mange severity is associated with reduced genomic variation and evidence of selection in Yellowstone National Park wolves (). Evol Appl. 2021 ;14(2):429-445.
Deng D, Yan C, Pan X, Mahfouz M, Wang J, Zhu J-K, et al. Structural basis for sequence-specific recognition of DNA by TAL effectors. Science. 2012 ;335(6069):720-3.
Devergne O, Sun GH, Schüpbach T. Stratum, a Homolog of the Human GEF Mss4, Partnered with Rab8, Controls the Basal Restriction of Basement Membrane Proteins in Epithelial Cells. Cell Rep. 2017 ;18(8):1831-1839.
Di Talia S, Wieschaus EF. Simple biochemical pathways far from steady state can provide switchlike and integrated responses. Biophys J. 2014 ;107(3):L1-L4.
Diegmiller R, Doherty CA, Stern T, Alsous JImran, Shvartsman SY. Size scaling in collective cell growth. Development. 2021 ;148(18).
Diegmiller R, Montanelli H, Muratov CB, Shvartsman SY. Spherical Caps in Cell Polarization. Biophys J. 2018 ;115(1):26-30.
Ding Q, Gaska JM, Douam F, Wei L, Kim D, Balev M, et al. Species-specific disruption of STING-dependent antiviral cellular defenses by the Zika virus NS2B3 protease. Proc Natl Acad Sci U S A. 2018 ;115(27):E6310-E6318.
Doane MP, Morris MM, Papudeshi B, Allen L, Pande D, Haggerty JM, et al. The skin microbiome of elasmobranchs follows phylosymbiosis, but in teleost fishes, the microbiomes converge. Microbiome. 2020 ;8(1):93.
Donia MS, Cimermancic P, Schulze CJ, Brown LCWieland, Martin J, Mitreva M, et al. A systematic analysis of biosynthetic gene clusters in the human microbiome reveals a common family of antibiotics. Cell. 2014 ;158(6):1402-1414.