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2020
Chen Y-C, Seyedsayamdost MR, Ringstad N. A microbial metabolite synergizes with endogenous serotonin to trigger reproductive behavior. Proc Natl Acad Sci U S A. 2020 ;117(48):30589-30598.
Federspiel JD, Cook KC, Kennedy MA, Venkatesh SS, Otter CJ, Hofstadter WA, et al. Mitochondria and Peroxisome Remodeling across Cytomegalovirus Infection Time Viewed through the Lens of Inter-ViSTA. Cell Rep. 2020 ;32(4):107943.
Hammer SK, Zhang Y, Avalos JL. Mitochondrial Compartmentalization Confers Specificity to the 2-Ketoacid Recursive Pathway: Increasing Isopentanol Production in . ACS Synth Biol. 2020 ;9(3):546-555.
Mor DE, Murphy CT. Mitochondrial hyperactivity as a potential therapeutic target in Parkinson's disease. Transl Med Aging. 2020 ;4:117-120.
Statt A, Casademunt H, Brangwynne CP, Panagiotopoulos AZ. Model for disordered proteins with strongly sequence-dependent liquid phase behavior. J Chem Phys. 2020 ;152(7):075101.
Li Z, Liu B, Li SHsin-Jung, King CG, Gitai Z, Wingreen NS. Modeling microbial metabolic trade-offs in a chemostat. PLoS Comput Biol. 2020 ;16(8):e1008156.
Graim K, Gorenshteyn D, Robinson DG, Carriero NJ, Cahill JA, Chakrabarti R, et al. Modeling molecular development of breast cancer in canine mammary tumors. Genome Res. 2020 ;.
Farag MA, Hegazi NM, Donia MS. Molecular networking based LC/MS reveals novel biotransformation products of green coffee by ex vivo cultures of the human gut microbiome. Metabolomics. 2020 ;16(8):86.
Laval K, Maturana CJ, Enquist LW. Mouse Footpad Inoculation Model to Study Viral-Induced Neuroinflammatory Responses. J Vis Exp. 2020 ;(160).
Li A, Mao D, Yoshimura A, Rosen PC, W Martin L, Gallant É, et al.. Multi-Omic Analyses Provide Links between Low-Dose Antibiotic Treatment and Induction of Secondary Metabolism in Burkholderia thailandensis. mBio. 2020 ;11(1).
2019
Caruso A, Martinie RJ, Bushin LB, Seyedsayamdost MR. Macrocyclization via an Arginine-Tyrosine Crosslink Broadens the Reaction Scope of Radical -Adenosylmethionine Enzymes. J Am Chem Soc. 2019 ;141(42):16610-16614.
Minhas PS, Liu L, Moon PK, Joshi AU, Dove C, Mhatre S, et al. Macrophage de novo NAD synthesis specifies immune function in aging and inflammation. Nat Immunol. 2019 ;20(1):50-63.
Hashimoto Y, Kinoshita N, Greco TM, Federspiel JD, Beltran PMJean, Ueno N, et al. Mechanical Force Induces Phosphorylation-Mediated Signaling that Underlies Tissue Response and Robustness in Xenopus Embryos. Cell Syst. 2019 ;8(3):226-241.e7.
Yan J, Fei C, Mao S, Moreau A, Wingreen NS, Košmrlj A, et al.. Mechanical instability and interfacial energy drive biofilm morphogenesis. Elife. 2019 ;8.
Spurlin JW, Siedlik MJ, Nerger BA, Pang M-F, Jayaraman S, Zhang R, et al. Mesenchymal proteases and tissue fluidity remodel the extracellular matrix during airway epithelial branching in the embryonic avian lung. Development. 2019 ;146(16).
Zhang Y, Kleiner RE. A Metabolic Engineering Approach to Incorporate Modified Pyrimidine Nucleosides into Cellular RNA. J Am Chem Soc. 2019 ;141(8):3347-3351.
Jang C, Hui S, Zeng X, Cowan AJ, Wang L, Chen L, et al. Metabolite Exchange between Mammalian Organs Quantified in Pigs. Cell Metab. 2019 ;30(3):594-606.e3.
Estrella MA, Du J, Chen L, Rath S, Prangley E, Chitrakar A, et al. The metabolites NADP and NADPH are the targets of the circadian protein Nocturnin (Curled). Nat Commun. 2019 ;10(1):2367.
Sugimoto Y, Camacho FR, Wang S, Chankhamjon P, Odabas A, Biswas A, et al. A metagenomic strategy for harnessing the chemical repertoire of the human microbiome. Science. 2019 ;366(6471).
Murray LA, Combs AN, Rekapalli P, Cristea IM. Methods for characterizing protein acetylation during viral infection. Methods Enzymol. 2019 ;626:587-620.
Zan J, Li Z, Tianero MDiarey, Davis J, Hill RT, Donia MS. A microbial factory for defensive kahalalides in a tripartite marine symbiosis. Science. 2019 ;364(6445).
Nerger BA, Brun P-T, Nelson CM. Microextrusion printing cell-laden networks of type I collagen with patterned fiber alignment and geometry. Soft Matter. 2019 ;15(28):5728-5738.
Sanfilippo JE, Lorestani A, Koch MD, Bratton BP, Siryaporn A, Stone HA, et al. Microfluidic-based transcriptomics reveal force-independent bacterial rheosensing. Nat Microbiol. 2019 ;4(8):1274-1281.
Bradley PH, Gibney PA, Botstein D, Troyanskaya OG, Rabinowitz JD. Minor Isozymes Tailor Yeast Metabolism to Carbon Availability. mSystems. 2019 ;4(1).
Betsinger CN, Cristea IM. Mitochondrial Function, Metabolic Regulation, and Human Disease Viewed through the Prism of Sirtuin 4 (SIRT4) Functions. J Proteome Res. 2019 ;18(5):1929-1938.