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2018
Sauls K, Greco TM, Wang L, Zou M, Villasmil M, Qian L, et al. Initiating Events in Direct Cardiomyocyte Reprogramming. Cell Rep. 2018 ;22(7):1913-1922.
Shin Y, Chang Y-C, Lee DSW, Berry J, Sanders DW, Ronceray P, et al. Liquid Nuclear Condensates Mechanically Sense and Restructure the Genome. Cell. 2018 ;175(6):1481-1491.e13.
Kachaev ZM, Lebedeva LA, Kozlov EN, Toropygin IY, Schedl P, Shidlovskii YV. Paip2 is localized to active promoters and loaded onto nascent mRNA in Drosophila. Cell Cycle. 2018 ;17(14):1708-1720.
2017
Chetverina D, Fujioka M, Erokhin M, Georgiev P, Jaynes JB, Schedl P. Boundaries of loop domains (insulators): Determinants of chromosome form and function in multicellular eukaryotes. Bioessays. 2017 ;39(3).
Hannon CE, Blythe SA, Wieschaus EF. Concentration dependent chromatin states induced by the bicoid morphogen gradient. Elife. 2017 ;6.
Cleard F, Wolle D, Taverner AM, Aoki T, Deshpande G, Andolfatto P, et al. Different Evolutionary Strategies To Conserve Chromatin Boundary Function in the Bithorax Complex. Genetics. 2017 ;205(2):589-603.
David Y, Muir TW. Emerging Chemistry Strategies for Engineering Native Chromatin. J Am Chem Soc. 2017 ;139(27):9090-9096.
Lomaev D, Mikhailova A, Erokhin M, Shaposhnikov AV, Moresco JJ, Blokhina T, et al. The GAGA factor regulatory network: Identification of GAGA factor associated proteins. PLoS One. 2017 ;12(3):e0173602.
Wang X, Paucek RD, Gooding AR, Brown ZZ, Ge EJ, Muir TW, et al. Molecular analysis of PRC2 recruitment to DNA in chromatin and its inhibition by RNA. Nat Struct Mol Biol. 2017 ;24(12):1028-1038.
Santos JMendonca, Josling G, Ross P, Joshi P, Orchard L, Campbell T, et al. Red Blood Cell Invasion by the Malaria Parasite Is Coordinated by the PfAP2-I Transcription Factor. Cell Host Microbe. 2017 ;21(6):731-741.e10.
Debelouchina GT, Gerecht K, Muir TW. Ubiquitin utilizes an acidic surface patch to alter chromatin structure. Nat Chem Biol. 2017 ;13(1):105-110.
2016
Blythe SA, Wieschaus EF. Establishment and maintenance of heritable chromatin structure during early embryogenesis. Elife. 2016 ;5.
Kyrchanova O, Mogila V, Wolle D, Deshpande G, Parshikov A, Cleard F, et al. Functional Dissection of the Blocking and Bypass Activities of the Fab-8 Boundary in the Drosophila Bithorax Complex. PLoS Genet. 2016 ;12(7):e1006188.
Geronimo CL, Zakian VA. Getting it done at the ends: Pif1 family DNA helicases and telomeres. DNA Repair (Amst). 2016 ;44:151-158.
Zhou J, Troyanskaya OG. Probabilistic modelling of chromatin code landscape reveals functional diversity of enhancer-like chromatin states. Nat Commun. 2016 ;7:10528.
Müller MM, Fierz B, Bittova L, Liszczak G, Muir TW. A two-state activation mechanism controls the histone methyltransferase Suv39h1. Nat Chem Biol. 2016 ;12(3):188-93.
2015
Kyrchanova O, Mogila V, Wolle D, Magbanua JPaolo, White R, Georgiev P, et al. The boundary paradox in the Bithorax complex. Mech Dev. 2015 ;138 Pt 2:122-132.
Bonchuk A, Maksimenko O, Kyrchanova O, Ivlieva T, Mogila V, Deshpande G, et al. Functional role of dimerization and CP190 interacting domains of CTCF protein in Drosophila melanogaster. BMC Biol. 2015 ;13:63.
Holt MT, David Y, Pollock S, Tang Z, Jeon J, Kim J, et al. Identification of a functional hotspot on ubiquitin required for stimulation of methyltransferase activity on chromatin. Proc Natl Acad Sci U S A. 2015 ;112(33):10365-70.
Ortega-Esteban A, Condezo GN, Pérez-Berná AJ, Chillón M, S Flint J, Reguera D, et al.. Mechanics of Viral Chromatin Reveals the Pressurization of Human Adenovirus. ACS Nano. 2015 ;9(11):10826-33.
Zhou J, Troyanskaya OG. Predicting effects of noncoding variants with deep learning-based sequence model. Nat Methods. 2015 ;12(10):931-4.
Izhar L, Adamson B, Ciccia A, Lewis J, Pontano-Vaites L, Leng Y, et al. A Systematic Analysis of Factors Localized to Damaged Chromatin Reveals PARP-Dependent Recruitment of Transcription Factors. Cell Rep. 2015 ;11(9):1486-500.
2010
Chou DM, Adamson B, Dephoure NE, Tan X, Nottke AC, Hurov KE, et al. A chromatin localization screen reveals poly (ADP ribose)-regulated recruitment of the repressive polycomb and NuRD complexes to sites of DNA damage. Proc Natl Acad Sci U S A. 2010 ;107(43):18475-80.