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Chen C-F, Pohl TJ, Chan A, Slocum JS, Zakian VA. Saccharomyces cerevisiae Centromere RNA Is Negatively Regulated by Cbf1 and Its Unscheduled Synthesis Impacts CenH3 Binding. Genetics. 2019 ;.
Valastyan JS, Kraml CM, Pelczer I, Ferrante T, Bassler BL. Saccharomyces cerevisiae Requires To Produce 4-Hydroxy-5-Methylfuran-3(2H)-One, a Mimic of the Bacterial Quorum-Sensing Autoinducer AI-2. mBio. 2021 ;12(2).
Miller ST, Xavier KB, Campagna SR, Taga ME, Semmelhack MF, Bassler BL, et al. Salmonella typhimurium recognizes a chemically distinct form of the bacterial quorum-sensing signal AI-2. Mol Cell. 2004 ;15(5):677-87.
DeCandia AL, Schrom EC, Brandell EE, Stahler DR, vonHoldt BM. Sarcoptic mange severity is associated with reduced genomic variation and evidence of selection in Yellowstone National Park wolves (). Evol Appl. 2021 ;14(2):429-445.
Menon R, Otto EA, Sealfon R, Nair V, Wong AK, Theesfeld CL, et al. SARS-CoV-2 receptor networks in diabetic and COVID-19 associated kidney disease. medRxiv. 2020 ;.
Menon R, Otto EA, Sealfon R, Nair V, Wong AK, Theesfeld CL, et al. SARS-CoV-2 receptor networks in diabetic and COVID-19-associated kidney disease. Kidney Int. 2020 ;98(6):1502-1518.
Sanders DW, Jumper CC, Ackerman PJ, Bracha D, Donlic A, Kim H, et al. SARS-CoV-2 requires cholesterol for viral entry and pathological syncytia formation. Elife. 2021 ;10.
Letizia AG, Ramos I, Obla A, Goforth C, Weir DL, Ge Y, et al. SARS-CoV-2 Transmission among Marine Recruits during Quarantine. N Engl J Med. 2020 ;383(25):2407-2416.
Inclan YF, Persat A, Greninger A, Von Dollen J, Johnson J, Krogan N, et al. A scaffold protein connects type IV pili with the Chp chemosensory system to mediate activation of virulence signaling in Pseudomonas aeruginosa. Mol Microbiol. 2016 ;101(4):590-605.
Feng J, Nunes JK, Shin S, Yan J, Kong YLin, Prud'homme RK, et al. A Scalable Platform for Functional Nanomaterials via Bubble-Bursting. Adv Mater. 2016 ;28(21):4047-52.
Campàs O, Mallarino R, Herrel A, Abzhanov A, Brenner MP. Scaling and shear transformations capture beak shape variation in Darwin's finches. Proc Natl Acad Sci U S A. 2010 ;107(8):3356-60.
Gopalan P, Hao W, Blei DM, Storey JD. Scaling probabilistic models of genetic variation to millions of humans. Nat Genet. 2016 ;48(12):1587-1590.
Bauer G, Fakhri N, Kicheva A, Kondev J, Kruse K, Noji H, et al. The Science of Living Matter for Tomorrow. Cell Syst. 2018 ;6(4):400-402.
Tkačik G, Marre O, Amodei D, Schneidman E, Bialek W, Berry MJ. Searching for collective behavior in a large network of sensory neurons. PLoS Comput Biol. 2014 ;10(1):e1003408.
Bharucha N, Liu Y, Papanikou E, McMahon C, Esaki M, Jeffrey PD, et al. Sec16 influences transitional ER sites by regulating rather than organizing COPII. Mol Biol Cell. 2013 ;24(21):3406-19.
Eisemann TJ, Allen F, Lau K, Shimamura GR, Jeffrey PD, Hughson FM. The Sec1/Munc18 protein Vps45 holds the Qa-SNARE Tlg2 in an open conformation. Elife. 2020 ;9.
Klaus JR, Coulon PML, Koirala P, Seyedsayamdost MR, Déziel E, Chandler JR. Secondary metabolites from the Burkholderia pseudomallei complex: structure, ecology, and evolution. J Ind Microbiol Biotechnol. 2020 ;47(9-10):877-887.
Jemielita M, Mashruwala AA, Valastyan JS, Wingreen NS, Bassler BL. Secreted Proteases Control the Timing of Aggregative Community Formation in Vibrio cholerae. mBio. 2021 ;:e0151821.
Lognonné P, Banerdt WB, Giardini D, Pike WT, Christensen U, Laudet P, et al.. SEIS: Insight's Seismic Experiment for Internal Structure of Mars. Space Sci Rev. 2019 ;215(1):12.
Shirvani-Dastgerdi E, Winer BY, Celià-Terrassa T, Kang Y, Tabernero D, Yagmur E, et al.. Selection of the highly replicative and partially multidrug resistant rtS78T HBV polymerase mutation during TDF-ETV combination therapy. J Hepatol. 2017 ;67(2):246-254.
A Arguello E, Leach RW, Kleiner RE. Selection with a Site-Specifically Modified RNA Library Reveals the Binding Preferences of N-Methyladenosine Reader Proteins. Biochemistry. 2019 ;58(31):3386-3395.
Douam F, Ziegler CGK, Hrebikova G, Fant B, Leach R, Parsons L, et al. Selective expansion of myeloid and NK cells in humanized mice yields human-like vaccine responses. Nat Commun. 2018 ;9(1):5031.
Roussarie J-P, Yao V, Rodriguez-Rodriguez P, Oughtred R, Rust J, Plautz Z, et al. Selective Neuronal Vulnerability in Alzheimer's Disease: A Network-Based Analysis. Neuron. 2020 ;107(5):821-835.e12.
Chen KM, Cofer EM, Zhou J, Troyanskaya OG. Selene: a PyTorch-based deep learning library for sequence data. Nat Methods. 2019 ;16(4):315-318.
Kobayashi N, Yanase K, Sato T, Unzai S, Hecht MH, Arai R. Self-Assembling Nano-Architectures Created from a Protein Nano-Building Block Using an Intermolecularly Folded Dimeric de Novo Protein. J Am Chem Soc. 2015 ;137(35):11285-93.