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2022
Bridges AA, Prentice JA, Fei C, Wingreen NS, Bassler BL. Quantitative input-output dynamics of a c-di-GMP signal transduction cascade in Vibrio cholerae. PLoS Biol. 2022 ;20(3):e3001585.
2021
Bartman CR, TeSlaa T, Rabinowitz JD. Quantitative flux analysis in mammals. Nat Metab. 2021 ;3(7):896-908.
Duddy OP, Bassler BL. Quorum sensing across bacterial and viral domains. PLoS Pathog. 2021 ;17(1):e1009074.
Rued BE, Covington BC, Bushin LB, Szewczyk G, Laczkovich I, Seyedsayamdost MR, et al. Quorum Sensing in Streptococcus mutans Regulates Production of Tryglysin, a Novel RaS-RiPP Antimicrobial Compound. mBio. 2021 ;12(2).
2020
Pereira TD, Shaevitz JW, Murthy M. Quantifying behavior to understand the brain. Nat Neurosci. 2020 ;23(12):1537-1549.
Sivaloganathan DM, Wan X, Brynildsen MP. Quantifying Nitric Oxide Flux Distributions. Methods Mol Biol. 2020 ;2088:161-188.
Hui S, Cowan AJ, Zeng X, Yang L, TeSlaa T, Li X, et al. Quantitative Fluxomics of Circulating Metabolites. Cell Metab. 2020 ;32(4):676-688.e4.
Sivaloganathan DM, Brynildsen MP. Quantitative Modeling Extends the Antibacterial Activity of Nitric Oxide. Front Physiol. 2020 ;11:330.
2019
Taylor NO, Wei M-T, Stone HA, Brangwynne CP. Quantifying Dynamics in Phase-Separated Condensates Using Fluorescence Recovery after Photobleaching. Biophys J. 2019 ;117(7):1285-1300.
Neinast MD, Jang C, Hui S, Murashige DS, Chu Q, Morscher RJ, et al. Quantitative Analysis of the Whole-Body Metabolic Fate of Branched-Chain Amino Acids. Cell Metab. 2019 ;29(2):417-429.e4.
Slutzky M, Stone HA, Nunes JK. A quantitative study of the effect of flow on the photopolymerization of fibers. Soft Matter. 2019 ;15(46):9553-9564.
2018
Liu L, Su X, Quinn WJ, Hui S, Krukenberg K, Frederick DW, et al. Quantitative Analysis of NAD Synthesis-Breakdown Fluxes. Cell Metab. 2018 ;27(5):1067-1080.e5.
Goyal Y, Schüpbach T, Shvartsman SY. A quantitative model of developmental RTK signaling. Dev Biol. 2018 ;442(1):80-86.
Sonnett M, Gupta M, Nguyen T, Wühr M. Quantitative Proteomics for Xenopus Embryos II, Data Analysis. Methods Mol Biol. 2018 ;1865:195-215.
Gupta M, Sonnett M, Ryazanova L, Presler M, Wühr M. Quantitative Proteomics of Xenopus Embryos I, Sample Preparation. Methods Mol Biol. 2018 ;1865:175-194.
McRose DL, Baars O, Seyedsayamdost MR, Morel FMM. Quorum sensing and iron regulate a two-for-one siderophore gene cluster in . Proc Natl Acad Sci U S A. 2018 ;115(29):7581-7586.
Jemielita M, Wingreen NS, Bassler BL. Quorum sensing controls multicellular aggregate formation. Elife. 2018 ;7.
2017
Calhoun AJ, Murthy M. Quantifying behavior to solve sensorimotor transformations: advances from worms and flies. Curr Opin Neurobiol. 2017 ;46:90-98.
Høyland-Kroghsbo NM, Paczkowski J, Mukherjee S, Broniewski J, Westra E, Bondy-Denomy J, et al.. Quorum sensing controls the Pseudomonas aeruginosa CRISPR-Cas adaptive immune system. Proc Natl Acad Sci U S A. 2017 ;114(1):131-135.
2016
Henry TC, Brynildsen MP. Quantifying Current Events Identifies a Novel Endurance Regulator. Trends Microbiol. 2016 ;24(5):324-326.
Degtjarik O, Brynda J, Ettrichova O, Kuty M, Sinha D, Smatanova IKuta, et al. Quantum Calculations Indicate Effective Electron Transfer between FMN and Benzoquinone in a New Crystal Structure of Escherichia coli WrbA. J Phys Chem B. 2016 ;120(22):4867-77.
Papenfort K, Bassler BL. Quorum sensing signal-response systems in Gram-negative bacteria. Nat Rev Microbiol. 2016 ;14(9):576-88.
2015
Feng L, Rutherford ST, Papenfort K, Bagert JD, van Kessel JC, Tirrell DA, et al. A qrr noncoding RNA deploys four different regulatory mechanisms to optimize quorum-sensing dynamics. Cell. 2015 ;160(1-2):228-40.
van Kessel JC, Rutherford ST, Cong J-P, Quinodoz S, Healy J, Bassler BL. Quorum sensing regulates the osmotic stress response in Vibrio harveyi. J Bacteriol. 2015 ;197(1):73-80.
2014
Shao Y, Bassler BL. Quorum regulatory small RNAs repress type VI secretion in Vibrio cholerae. Mol Microbiol. 2014 ;92(5):921-30.