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2022
Pisano TJ, Hoag AT, Dhanerawala ZM, Guariglia SR, Jung C, Boele H-J, et al. Automated high-throughput mouse transsynaptic viral tracing using iDISCO+ tissue clearing, light-sheet microscopy, and BrainPipe. STAR Protoc. 2022 ;3(2):101289.
2021
Koch MD, Fei C, Wingreen NS, Shaevitz JW, Gitai Z. Competitive binding of independent extension and retraction motors explains the quantitative dynamics of type IV pili. Proc Natl Acad Sci U S A. 2021 ;118(8).
2020
Alfaro-Aco R, Thawani A, Petry S. Biochemical reconstitution of branching microtubule nucleation. Elife. 2020 ;9.
Zhao J, Chalarca CFernando S, Nunes JK, Stone HA, Emrick T. Self-Propelled Supracolloidal Fibers from Multifunctional Polymer Surfactants and Droplets. Macromol Rapid Commun. 2020 ;41(15):e2000334.
Thawani A, Rale MJ, Coudray N, Bhabha G, Stone HA, Shaevitz JW, et al. The transition state and regulation of γ-TuRC-mediated microtubule nucleation revealed by single molecule microscopy. Elife. 2020 ;9.
2019
Giovannucci A, Friedrich J, Gunn P, Kalfon J, Brown BL, Koay SAnn, et al. CaImAn an open source tool for scalable calcium imaging data analysis. Elife. 2019 ;8.
Barrett TC, Mok WWK, Murawski AM, Brynildsen MP. Enhanced antibiotic resistance development from fluoroquinolone persisters after a single exposure to antibiotic. Nat Commun. 2019 ;10(1):1177.
2018
Hogue IB, Jean J, Esteves AD, Tanneti NS, Scherer J, Enquist LW. Functional Carboxy-Terminal Fluorescent Protein Fusion to Pseudorabies Virus Small Capsid Protein VP26. J Virol. 2018 ;92(1).
Bracha D, Walls MT, Wei M-T, Zhu L, Kurian M, Avalos JL, et al. Mapping Local and Global Liquid Phase Behavior in Living Cells Using Photo-Oligomerizable Seeds. Cell. 2018 ;175(6):1467-1480.e13.
Marvin JS, Scholl B, Wilson DE, Podgorski K, Kazemipour A, Müller JAlexander, et al.. Stability, affinity, and chromatic variants of the glutamate sensor iGluSnFR. Nat Methods. 2018 ;15(11):936-939.
2017
Nguyen JP, Linder AN, Plummer GS, Shaevitz JW, Leifer AM. Automatically tracking neurons in a moving and deforming brain. PLoS Comput Biol. 2017 ;13(5):e1005517.
Lerit DA, Shebelut CW, Lawlor KJ, Rusan NM, Gavis ER, Schedl P, et al. Germ Cell-less Promotes Centrosome Segregation to Induce Germ Cell Formation. Cell Rep. 2017 ;18(4):831-839.
Goglia AG, Wilson MZ, DiGiorno DB, Toettcher JE. Optogenetic Control of Ras/Erk Signaling Using the Phy-PIF System. Methods Mol Biol. 2017 ;1636:3-20.
Lim B, Dsilva CJ, Kevrekidis IG, Shvartsman SY. Reconstructing ERK Signaling in the Drosophila Embryo from Fixed Images. Methods Mol Biol. 2017 ;1487:337-351.
2016
Nguyen JP, Bratton BP, Shaevitz JW. Biophysical Measurements of Bacterial Cell Shape. Methods Mol Biol. 2016 ;1440:227-45.
Hogue IB, Scherer J, Enquist LW. Exocytosis of Alphaherpesvirus Virions, Light Particles, and Glycoproteins Uses Constitutive Secretory Mechanisms. mBio. 2016 ;7(3).
Levario TJ, Lim B, Shvartsman SY, Lu H. Microfluidics for High-Throughput Quantitative Studies of Early Development. Annu Rev Biomed Eng. 2016 ;18:285-309.
Ouzounov N, Nguyen JP, Bratton BP, Jacobowitz D, Gitai Z, Shaevitz JW. MreB Orientation Correlates with Cell Diameter in Escherichia coli. Biophys J. 2016 ;111(5):1035-43.
2015
Bosse JB, Tanneti NS, Hogue IB, Enquist LW. Open LED Illuminator: A Simple and Inexpensive LED Illuminator for Fast Multicolor Particle Tracking in Neurons. PLoS One. 2015 ;10(11):e0143547.
Bosse JB, Hogue IB, Feric M, Thiberge SY, Sodeik B, Brangwynne CP, et al. Remodeling nuclear architecture allows efficient transport of herpesvirus capsids by diffusion. Proc Natl Acad Sci U S A. 2015 ;112(42):E5725-33.
Berry J, Weber SC, Vaidya N, Haataja M, Brangwynne CP. RNA transcription modulates phase transition-driven nuclear body assembly. Proc Natl Acad Sci U S A. 2015 ;112(38):E5237-45.
Morgenstein RM, Bratton BP, Nguyen JP, Ouzounov N, Shaevitz JW, Gitai Z. RodZ links MreB to cell wall synthesis to mediate MreB rotation and robust morphogenesis. Proc Natl Acad Sci U S A. 2015 ;112(40):12510-5.
Bratton BP, Shaevitz JW. Simple Experimental Methods for Determining the Apparent Focal Shift in a Microscope System. PLoS One. 2015 ;10(8):e0134616.
2013
Bharucha N, Liu Y, Papanikou E, McMahon C, Esaki M, Jeffrey PD, et al. Sec16 influences transitional ER sites by regulating rather than organizing COPII. Mol Biol Cell. 2013 ;24(21):3406-19.
2012
Adamson B, Smogorzewska A, Sigoillot FD, King RW, Elledge SJ. A genome-wide homologous recombination screen identifies the RNA-binding protein RBMX as a component of the DNA-damage response. Nat Cell Biol. 2012 ;14(3):318-28.