Publications
Lower respiratory tract infections in children requiring mechanical ventilation: a multicentre prospective surveillance study incorporating airway metagenomics. Lancet Microbe. 2022 ;3(4):e284-e293.
. Noisy metabolism can promote microbial cross-feeding. Elife. 2022 ;11.
. Physiological limitations and opportunities in microbial metabolic engineering. Nat Rev Microbiol. 2022 ;20(1):35-48.
. A biophysical limit for quorum sensing in biofilms. Proc Natl Acad Sci U S A. 2021 ;118(21).
. CO-Driven diffusiophoresis for maintaining a bacteria-free surface. Soft Matter. 2021 ;17(9):2568-2576.
. Counting Chromosomes in Individual Bacteria to Quantify Their Impacts on Persistence. Methods Mol Biol. 2021 ;2357:125-146.
. Evidence for biosurfactant-induced flow in corners and bacterial spreading in unsaturated porous media. Proc Natl Acad Sci U S A. 2021 ;118(38).
. A Natural Product Chemist's Guide to Unlocking Silent Biosynthetic Gene Clusters. Annu Rev Biochem. 2021 ;90:763-788.
. Phagosome-Bacteria Interactions from the Bottom Up. Annu Rev Chem Biomol Eng. 2021 ;12:309-331.
. Quorum sensing across bacterial and viral domains. PLoS Pathog. 2021 ;17(1):e1009074.
. . Modeling microbial metabolic trade-offs in a chemostat. PLoS Comput Biol. 2020 ;16(8):e1008156.
. Personalized Mapping of Drug Metabolism by the Human Gut Microbiome. Cell. 2020 ;181(7):1661-1679.e22.
. . Cooperation between partial-nitrification, complete ammonia oxidation (comammox), and anaerobic ammonia oxidation (anammox) in sludge digestion liquid for nitrogen removal. Environ Pollut. 2019 ;254(Pt A):112965.
. Definitions and guidelines for research on antibiotic persistence. Nat Rev Microbiol. 2019 ;17(7):441-448.
. Detection of Natural Products and Their Producers in Ocean Sediments. Appl Environ Microbiol. 2019 ;85(8).
. A genetics-free method for high-throughput discovery of cryptic microbial metabolites. Nat Chem Biol. 2019 ;15(2):161-168.
. Microfluidic-based transcriptomics reveal force-independent bacterial rheosensing. Nat Microbiol. 2019 ;4(8):1274-1281.
. Structural mechanism of transcription inhibition by lasso peptides microcin J25 and capistruin. Proc Natl Acad Sci U S A. 2019 ;116(4):1273-1278.
. Substrate-rigidity dependent migration of an idealized twitching bacterium. Soft Matter. 2019 ;15(30):6224-6236.
. Surviving as a Community: Antibiotic Tolerance and Persistence in Bacterial Biofilms. Cell Host Microbe. 2019 ;26(1):15-21.
. Toward a global picture of bacterial secondary metabolism. J Ind Microbiol Biotechnol. 2019 ;46(3-4):301-311.
. Microbiology: Peeling Back the Layers of Bacterial Envelope Mechanics. Curr Biol. 2018 ;28(20):R1210-R1211.
. Nitric Oxide Stress as a Metabolic Flux. Adv Microb Physiol. 2018 ;73:63-76.
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