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Kyrchanova O, Maksimenko O, Ibragimov A, Sokolov V, Postika N, Lukyanova M, et al. The insulator functions of the polydactyl C2H2 zinc finger protein CTCF: Necessity versus sufficiency. Sci Adv. 2020 ;6(13):eaaz3152.
Stern T, Shvartsman SY, Wieschaus EF. Template-based mapping of dynamic motifs in tissue morphogenesis. PLoS Comput Biol. 2020 ;16(8):e1008049.
Zhou J, Schor IE, Yao V, Theesfeld CL, Marco-Ferreres R, Tadych A, et al. Accurate genome-wide predictions of spatio-temporal gene expression during embryonic development. PLoS Genet. 2019 ;15(9):e1008382.
Baker CA, Clemens J, Murthy M. Acoustic Pattern Recognition and Courtship Songs: Insights from Insects. Annu Rev Neurosci. 2019 ;42:129-147.
Kyrchanova O, Sabirov M, Mogila V, Kurbidaeva A, Postika N, Maksimenko O, et al. Complete reconstitution of bypass and blocking functions in a minimal artificial insulator from complex. Proc Natl Acad Sci U S A. 2019 ;116(27):13462-13467.
Fedotova A, Clendinen C, Bonchuk A, Mogila V, Aoki T, Georgiev P, et al. Functional dissection of the developmentally restricted BEN domain chromatin boundary factor Insensitive. Epigenetics Chromatin. 2019 ;12(1):2.
Shvartsman SY, Krajnc M. Nuclear (Bio)physics in the Embryo. Cell. 2019 ;177(4):799-801.
Patel AL, Yeung E, McGuire SE, Wu AY, Toettcher JE, Burdine RD, et al. Optimizing photoswitchable MEK. Proc Natl Acad Sci U S A. 2019 ;116(51):25756-25763.
Johnson HE, Toettcher JE. Signaling Dynamics Control Cell Fate in the Early Drosophila Embryo. Dev Cell. 2019 ;48(3):361-370.e3.
Fedotova A, Aoki T, Rossier M, Mishra RKumar, Clendinen C, Kyrchanova O, et al. The BEN Domain Protein Insensitive Binds to the Chromatin Boundary To Establish Proper Segmental Identity in . Genetics. 2018 ;210(2):573-585.
Kyrchanova O, Kurbidaeva A, Sabirov M, Postika N, Wolle D, Aoki T, et al. The bithorax complex iab-7 Polycomb response element has a novel role in the functioning of the Fab-7 chromatin boundary. PLoS Genet. 2018 ;14(8):e1007442.
Chen H, Levo M, Barinov L, Fujioka M, Jaynes JB, Gregor T. Dynamic interplay between enhancer-promoter topology and gene activity. Nat Genet. 2018 ;50(9):1296-1303.
Clemens J, Ozeri-Engelhard N, Murthy M. Fast intensity adaptation enhances the encoding of sound in Drosophila. Nat Commun. 2018 ;9(1):134.
Streichan SJ, Lefebvre MF, Noll N, Wieschaus EF, Shraiman BI. Global morphogenetic flow is accurately predicted by the spatial distribution of myosin motors. Elife. 2018 ;7.
Goyal Y, Schüpbach T, Shvartsman SY. A quantitative model of developmental RTK signaling. Dev Biol. 2018 ;442(1):80-86.
Hannon CE, Blythe SA, Wieschaus EF. Concentration dependent chromatin states induced by the bicoid morphogen gradient. Elife. 2017 ;6.
Cleard F, Wolle D, Taverner AM, Aoki T, Deshpande G, Andolfatto P, et al. Different Evolutionary Strategies To Conserve Chromatin Boundary Function in the Bithorax Complex. Genetics. 2017 ;205(2):589-603.
Song Y, Marmion RA, Park JO, Biswas D, Rabinowitz JD, Shvartsman SY. Dynamic Control of dNTP Synthesis in Early Embryos. Dev Cell. 2017 ;42(3):301-308.e3.
Stern DL, Clemens J, Coen P, Calhoun AJ, Hogenesch JB, Arthur BJ, et al. Experimental and statistical reevaluation provides no evidence for courtship song rhythms. Proc Natl Acad Sci U S A. 2017 ;114(37):9978-9983.
Lomaev D, Mikhailova A, Erokhin M, Shaposhnikov AV, Moresco JJ, Blokhina T, et al. The GAGA factor regulatory network: Identification of GAGA factor associated proteins. PLoS One. 2017 ;12(3):e0173602.
Pyrowolakis G, Veikkolainen V, Yakoby N, Shvartsman SY. Gene regulation during eggshell patterning. Proc Natl Acad Sci U S A. 2017 ;114(23):5808-5813.
Lerit DA, Shebelut CW, Lawlor KJ, Rusan NM, Gavis ER, Schedl P, et al. Germ Cell-less Promotes Centrosome Segregation to Induce Germ Cell Formation. Cell Rep. 2017 ;18(4):831-839.
Cardoso MArruda, Fontenele M, Lim B, Bisch PMascarello, Shvartsman SY, Araujo HMarcolla. A novel function for the IκB inhibitor Cactus in promoting Dorsal nuclear localization and activity in the embryo. Development. 2017 ;144(16):2907-2913.
Aguilera-Gomez A, Zacharogianni M, van Oorschot MM, Genau H, Grond R, Veenendaal T, et al. Phospho-Rasputin Stabilization by Sec16 Is Required for Stress Granule Formation upon Amino Acid Starvation. Cell Rep. 2017 ;20(4):935-948.
Lim B, Dsilva CJ, Kevrekidis IG, Shvartsman SY. Reconstructing ERK Signaling in the Drosophila Embryo from Fixed Images. Methods Mol Biol. 2017 ;1487:337-351.