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2021
Chetverina D, Erokhin M, Schedl P. GAGA factor: a multifunctional pioneering chromatin protein. Cell Mol Life Sci. 2021 ;78(9):4125-4141.
Diegmiller R, Zhang L, Gameiro M, Barr J, Alsous JImran, Schedl P, et al. Mapping parameter spaces of biological switches. PLoS Comput Biol. 2021 ;17(2):e1008711.
2020
Song Y, Shvartsman SY. Chemical Embryology Redux: Metabolic Control of Development. Trends Genet. 2020 ;36(8):577-586.
Zhao Z, McBride CS. Evolution of olfactory circuits in insects. J Comp Physiol A Neuroethol Sens Neural Behav Physiol. 2020 ;206(3):353-367.
Dutta S, Djabrayan NJ-V, Smits CM, Rowley CW, Shvartsman SY. Excess dNTPs Trigger Oscillatory Surface Flow in the Early Drosophila Embryo. Biophys J. 2020 ;118(10):2349-2353.
Zung JL, McBride CS. How a fly came to love the vomit fruit. Nature. 2020 ;579(7799):345-346.
Kyrchanova O, Maksimenko O, Ibragimov A, Sokolov V, Postika N, Lukyanova M, et al. The insulator functions of the polydactyl C2H2 zinc finger protein CTCF: Necessity versus sufficiency. Sci Adv. 2020 ;6(13):eaaz3152.
Merkle JA, Wittes J, Schüpbach T. Signaling between somatic follicle cells and the germline patterns the egg and embryo of Drosophila. Curr Top Dev Biol. 2020 ;140:55-86.
Stern T, Shvartsman SY, Wieschaus EF. Template-based mapping of dynamic motifs in tissue morphogenesis. PLoS Comput Biol. 2020 ;16(8):e1008049.
2019
Zhou J, Schor IE, Yao V, Theesfeld CL, Marco-Ferreres R, Tadych A, et al. Accurate genome-wide predictions of spatio-temporal gene expression during embryonic development. PLoS Genet. 2019 ;15(9):e1008382.
Baker CA, Clemens J, Murthy M. Acoustic Pattern Recognition and Courtship Songs: Insights from Insects. Annu Rev Neurosci. 2019 ;42:129-147.
Kyrchanova O, Sabirov M, Mogila V, Kurbidaeva A, Postika N, Maksimenko O, et al. Complete reconstitution of bypass and blocking functions in a minimal artificial insulator from complex. Proc Natl Acad Sci U S A. 2019 ;116(27):13462-13467.
Fedotova A, Clendinen C, Bonchuk A, Mogila V, Aoki T, Georgiev P, et al. Functional dissection of the developmentally restricted BEN domain chromatin boundary factor Insensitive. Epigenetics Chromatin. 2019 ;12(1):2.
Shvartsman SY, Krajnc M. Nuclear (Bio)physics in the Embryo. Cell. 2019 ;177(4):799-801.
Patel AL, Yeung E, McGuire SE, Wu AY, Toettcher JE, Burdine RD, et al. Optimizing photoswitchable MEK. Proc Natl Acad Sci U S A. 2019 ;116(51):25756-25763.
Johnson HE, Toettcher JE. Signaling Dynamics Control Cell Fate in the Early Drosophila Embryo. Dev Cell. 2019 ;48(3):361-370.e3.
2018
Fedotova A, Aoki T, Rossier M, Mishra RKumar, Clendinen C, Kyrchanova O, et al. The BEN Domain Protein Insensitive Binds to the Chromatin Boundary To Establish Proper Segmental Identity in . Genetics. 2018 ;210(2):573-585.
Kyrchanova O, Kurbidaeva A, Sabirov M, Postika N, Wolle D, Aoki T, et al. The bithorax complex iab-7 Polycomb response element has a novel role in the functioning of the Fab-7 chromatin boundary. PLoS Genet. 2018 ;14(8):e1007442.
Chen H, Levo M, Barinov L, Fujioka M, Jaynes JB, Gregor T. Dynamic interplay between enhancer-promoter topology and gene activity. Nat Genet. 2018 ;50(9):1296-1303.
Clemens J, Ozeri-Engelhard N, Murthy M. Fast intensity adaptation enhances the encoding of sound in Drosophila. Nat Commun. 2018 ;9(1):134.
Streichan SJ, Lefebvre MF, Noll N, Wieschaus EF, Shraiman BI. Global morphogenetic flow is accurately predicted by the spatial distribution of myosin motors. Elife. 2018 ;7.
Goyal Y, Schüpbach T, Shvartsman SY. A quantitative model of developmental RTK signaling. Dev Biol. 2018 ;442(1):80-86.
2017
Hannon CE, Blythe SA, Wieschaus EF. Concentration dependent chromatin states induced by the bicoid morphogen gradient. Elife. 2017 ;6.
Cleard F, Wolle D, Taverner AM, Aoki T, Deshpande G, Andolfatto P, et al. Different Evolutionary Strategies To Conserve Chromatin Boundary Function in the Bithorax Complex. Genetics. 2017 ;205(2):589-603.
Song Y, Marmion RA, Park JO, Biswas D, Rabinowitz JD, Shvartsman SY. Dynamic Control of dNTP Synthesis in Early Embryos. Dev Cell. 2017 ;42(3):301-308.e3.