Publications
Checks and Balances with Use of the Keio Collection for Phenotype Testing. Methods Mol Biol. 2019 ;1927:125-138.
. Stationary phase persister formation in Escherichia coli can be suppressed by piperacillin and PBP3 inhibition. BMC Microbiol. 2019 ;19(1):140.
. Hidden long evolutionary memory in a model biochemical network. Phys Rev E. 2018 ;97(4-1):040401.
. Oncohistone mutations enhance chromatin remodeling and alter cell fates. Nat Chem Biol. 2021 ;17(4):403-411.
. The CPEB translational regulator, Orb, functions together with Par proteins to polarize the Drosophila oocyte. PLoS Genet. 2019 ;15(3):e1008012.
. The CPEB Protein Orb Specifies Oocyte Fate by a 3'UTR-Dependent Autoregulatory Loop. Genetics. 2019 ;213(4):1431-1446.
. Chitin utilization by marine bacteria. Chemotaxis to chitin oligosaccharides by Vibrio furnissii. J Biol Chem. 1991 ;266(36):24268-75.
. Rapid construction of a whole-genome transposon insertion collection for Shewanella oneidensis by Knockout Sudoku. Nat Commun. 2016 ;7:13270.
. Sec16 influences transitional ER sites by regulating rather than organizing COPII. Mol Biol Cell. 2013 ;24(21):3406-19.
. Nanos-mediated repression of hid protects larval sensory neurons after a global switch in sensitivity to apoptotic signals. Development. 2016 ;143(12):2147-59.
. Functional role of dimerization and CP190 interacting domains of CTCF protein in Drosophila melanogaster. BMC Biol. 2015 ;13:63.
. Epithelial geometry regulates spindle orientation and progenitor fate during formation of the mammalian epidermis. Elife. 2019 ;8.
. Identification of signaling pathways, matrix-digestion enzymes, and motility components controlling biofilm dispersal. Proc Natl Acad Sci U S A. 2020 ;117(51):32639-32647.
. In situ chromatin interactomics using a chemical bait and trap approach. Nat Chem. 2020 ;12(6):520-527.
. Mechanistic insights into the cellular effects of a novel FN1 variant associated with a spondylometaphyseal dysplasia. Clin Genet. 2018 ;94(5):429-437.
. A strategy for antagonizing quorum sensing. Mol Cell. 2011 ;42(2):199-209.
. Enhanced prime editing systems by manipulating cellular determinants of editing outcomes. Cell. 2021 ;184(22):5635-5652.e29.
. Selene: a PyTorch-based deep learning library for sequence data. Nat Methods. 2019 ;16(4):315-318.
. P2Y2 purinergic receptor modulates virus yield, calcium homeostasis, and cell motility in human cytomegalovirus-infected cells. Proc Natl Acad Sci U S A. 2019 ;116(38):18971-18982.
. Low-variance RNAs identify Parkinson's disease molecular signature in blood. Mov Disord. 2015 ;30(6):813-21.
. orco mutant mosquitoes lose strong preference for humans and are not repelled by volatile DEET. Nature. 2013 ;498(7455):487-91.
. Crystal structure of the human glucose transporter GLUT1. Nature. 2014 ;510(7503):121-5.
. Wnt Signaling in Sexual Dimorphism. Genetics. 2016 ;202(2):661-73.
. Role of the ABC transporter Mdr49 in Hedgehog signaling and germ cell migration. Development. 2016 ;143(12):2111-20.
. Mitotic internalization of planar cell polarity proteins preserves tissue polarity. Nat Cell Biol. 2011 ;13(8):893-902.
.