Publications
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Filters: Keyword is Evolution, Molecular [Clear All Filters]
Comparative genomic analysis reveals varying levels of mammalian adaptation to coronavirus infections. PLoS Comput Biol. 2021 ;17(11):e1009560.
. CrvA and CrvB form a curvature-inducing module sufficient to induce cell-shape complexity in Gram-negative bacteria. Nat Microbiol. 2021 ;6(7):910-920.
. Improved inference of tandem domain duplications. Bioinformatics. 2021 ;37(Suppl_1):i133-i141.
. Asymmetry between Activators and Deactivators in Functional Protein Networks. Sci Rep. 2020 ;10(1):10131.
. Coexpressed subunits of dual genetic origin define a conserved supercomplex mediating essential protein import into chloroplasts. Proc Natl Acad Sci U S A. 2020 ;117(51):32739-32749.
. Developmental plasticity shapes social traits and selection in a facultatively eusocial bee. Proc Natl Acad Sci U S A. 2020 ;117(24):13615-13625.
. Evolution of olfactory circuits in insects. J Comp Physiol A Neuroethol Sens Neural Behav Physiol. 2020 ;206(3):353-367.
. Implications of localized charge for human influenza A H1N1 hemagglutinin evolution: Insights from deep mutational scans. PLoS Comput Biol. 2020 ;16(6):e1007892.
. Conservation and divergence of protein pathways in the vertebrate heart. PLoS Biol. 2019 ;17(9):e3000437.
. Conservation of cell-intrinsic immune responses in diverse nonhuman primate species. Life Sci Alliance. 2019 ;2(5).
. Revealing evolutionary constraints on proteins through sequence analysis. PLoS Comput Biol. 2019 ;15(4):e1007010.
. A Two-Enzyme Adaptive Unit within Bacterial Folate Metabolism. Cell Rep. 2019 ;27(11):3359-3370.e7.
. Artificial Gene Amplification in Escherichia coli Reveals Numerous Determinants for Resistance to Metal Toxicity. J Mol Evol. 2018 ;86(2):103-110.
. Hidden long evolutionary memory in a model biochemical network. Phys Rev E. 2018 ;97(4-1):040401.
. Natural selection interacts with recombination to shape the evolution of hybrid genomes. Science. 2018 ;360(6389):656-660.
. A protein coevolution method uncovers critical features of the Hepatitis C Virus fusion mechanism. PLoS Pathog. 2018 ;14(3):e1006908.
. Different Evolutionary Strategies To Conserve Chromatin Boundary Function in the Bithorax Complex. Genetics. 2017 ;205(2):589-603.
. Sexual Dimorphism and Retinal Mosaic Diversification following the Evolution of a Violet Receptor in Butterflies. Mol Biol Evol. 2017 ;34(9):2271-2284.
. The Biochemical Evolution of Protein Complexes. Trends Biochem Sci. 2016 ;41(1):4-6.
. The concerted impact of domestication and transposon insertions on methylation patterns between dogs and grey wolves. Mol Ecol. 2016 ;25(8):1838-55.
. A de novo protein confers copper resistance in Escherichia coli. Protein Sci. 2016 ;25(7):1249-59.
. Genes and Odors Underlying the Recent Evolution of Mosquito Preference for Humans. Curr Biol. 2016 ;26(1):R41-6.
. Genetic subdivision and candidate genes under selection in North American grey wolves. Mol Ecol. 2016 ;25(1):380-402.
. A Genomic Map of the Effects of Linked Selection in Drosophila. PLoS Genet. 2016 ;12(8):e1006130.
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