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2019
Rath S, Prangley E, Donovan J, Demarest K, Wingreen NS, Meir Y, et al. Concerted 2-5A-Mediated mRNA Decay and Transcription Reprogram Protein Synthesis in the dsRNA Response. Mol Cell. 2019 ;75(6):1218-1228.e6.
Barr J, Gilmutdinov R, Wang L, Shidlovskii, ii Y, Schedl P. The CPEB Protein Orb Specifies Oocyte Fate by a 3'UTR-Dependent Autoregulatory Loop. Genetics. 2019 ;213(4):1431-1446.
Barr J, Charania S, Gilmutdinov R, Yakovlev K, Shidlovskii, ii Y, Schedl P. The CPEB translational regulator, Orb, functions together with Par proteins to polarize the Drosophila oocyte. PLoS Genet. 2019 ;15(3):e1008012.
Zhuo W, Liu Y, Li S, Guo D, Sun Q, Jin J, et al. Long Noncoding RNA GMAN, Up-regulated in Gastric Cancer Tissues, Is Associated With Metastasis in Patients and Promotes Translation of Ephrin A1 by Competitively Binding GMAN-AS. Gastroenterology. 2019 ;156(3):676-691.e11.
Rodriguez AE, Ducker GS, Billingham LK, Martinez CA, Mainolfi N, Suri V, et al. Serine Metabolism Supports Macrophage IL-1β Production. Cell Metab. 2019 ;29(4):1003-1011.e4.
2018
Gilbertson S, Federspiel JD, Hartenian E, Cristea IM, Glaunsinger B. Changes in mRNA abundance drive shuttling of RNA binding proteins, linking cytoplasmic RNA degradation to transcription. Elife. 2018 ;7.
Eagle WVI, Yeboah-Kordieh DK, Niepielko MG, Gavis ER. Distinct -acting elements mediate targeting and clustering of polar granule mRNAs. Development. 2018 ;145(22).
Painter HJ, Chung NChristophe, Sebastian A, Albert I, Storey JD, Llinás M. Genome-wide real-time in vivo transcriptional dynamics during Plasmodium falciparum blood-stage development. Nat Commun. 2018 ;9(1):2656.
Garcia HG, Gregor T. Live Imaging of mRNA Synthesis in Drosophila. Methods Mol Biol. 2018 ;1649:349-357.
Kachaev ZM, Lebedeva LA, Kozlov EN, Toropygin IY, Schedl P, Shidlovskii YV. Paip2 is localized to active promoters and loaded onto nascent mRNA in Drosophila. Cell Cycle. 2018 ;17(14):1708-1720.
Fröhlich KS, Förstner KU, Gitai Z. Post-transcriptional gene regulation by an Hfq-independent small RNA in Caulobacter crescentus. Nucleic Acids Res. 2018 ;46(20):10969-10982.
Little SC, Gregor T. Single mRNA Molecule Detection in Drosophila. Methods Mol Biol. 2018 ;1649:127-142.
Niepielko MG, Eagle WVI, Gavis ER. Stochastic Seeding Coupled with mRNA Self-Recruitment Generates Heterogeneous Drosophila Germ Granules. Curr Biol. 2018 ;28(12):1872-1881.e3.
2017
Son HG, Seo M, Ham S, Hwang W, Lee D, An SWoo A, et al. RNA surveillance via nonsense-mediated mRNA decay is crucial for longevity in daf-2/insulin/IGF-1 mutant C. elegans. Nat Commun. 2017 ;8:14749.
Wilson MZ, Ravindran PT, Lim WA, Toettcher JE. Tracing Information Flow from Erk to Target Gene Induction Reveals Mechanisms of Dynamic and Combinatorial Control. Mol Cell. 2017 ;67(5):757-769.e5.
2016
Crocker A, Guan X-J, Murphy CT, Murthy M. Cell-Type-Specific Transcriptome Analysis in the Drosophila Mushroom Body Reveals Memory-Related Changes in Gene Expression. Cell Rep. 2016 ;15(7):1580-1596.
Crow MS, Lum KK, Sheng X, Song B, Cristea IM. Diverse mechanisms evolved by DNA viruses to inhibit early host defenses. Crit Rev Biochem Mol Biol. 2016 ;51(6):452-481.
Barr J, Yakovlev KV, Shidlovskii, ii Y, Schedl P. Establishing and maintaining cell polarity with mRNA localization in Drosophila. Bioessays. 2016 ;38(3):244-53.
Tetruashvily MM, Melson JW, Park JJ, Peng X, Boulanger LM. Expression and alternative splicing of classical and nonclassical MHCI genes in the hippocampus and neuromuscular junction. Mol Cell Neurosci. 2016 ;72:34-45.
Abbaszadeh EK, Gavis ER. Fixed and live visualization of RNAs in Drosophila oocytes and embryos. Methods. 2016 ;98:34-41.
Misra M, Edmund H, Ennis D, Schlueter MA, Marot JE, Tambasco J, et al. A Genome-Wide Screen for Dendritically Localized RNAs Identifies Genes Required for Dendrite Morphogenesis. G3 (Bethesda). 2016 ;6(8):2397-405.
Geronimo CL, Zakian VA. Getting it done at the ends: Pif1 family DNA helicases and telomeres. DNA Repair (Amst). 2016 ;44:151-158.
Trovisco V, Belaya K, Nashchekin D, Irion U, Sirinakis G, Butler R, et al. mRNA localises to the oocyte anterior by random Dynein-mediated transport and anchoring. Elife. 2016 ;5.
Castellana M, Li SHsin-Jung, Wingreen NS. Spatial organization of bacterial transcription and translation. Proc Natl Acad Sci U S A. 2016 ;113(33):9286-91.
2015
Robinson JL, Brynildsen MP. An ensemble-guided approach identifies ClpP as a major regulator of transcript levels in nitric oxide-stressed Escherichia coli. Metab Eng. 2015 ;31:22-34.