Publications
Noisy metabolism can promote microbial cross-feeding. Elife. 2022 ;11.
. Enzyme regulation and mutation in a model serial-dilution ecosystem. Phys Rev E. 2021 ;104(4-1):044412.
. Temporal airway microbiome changes related to ventilator-associated pneumonia in children. Eur Respir J. 2021 ;57(3).
. A antibiotic modulates human skin microbiota composition in hair follicles. Sci Transl Med. 2020 ;12(570).
. Discovery and Biosynthesis of Streptosactin, a Sactipeptide with an Alternative Topology Encoded by Commensal Bacteria in the Human Microbiome. J Am Chem Soc. 2020 ;142(38):16265-16275.
. Ear mite infection is associated with altered microbial communities in genetically depauperate Santa Catalina Island foxes (Urocyon littoralis catalinae). Mol Ecol. 2020 ;29(8):1463-1475.
. Interactions among microbes, the immune system, and the circadian clock. Semin Immunopathol. 2020 ;42(6):697-708.
. A microbial metabolite synergizes with endogenous serotonin to trigger reproductive behavior. Proc Natl Acad Sci U S A. 2020 ;117(48):30589-30598.
. Molecular networking based LC/MS reveals novel biotransformation products of green coffee by ex vivo cultures of the human gut microbiome. Metabolomics. 2020 ;16(8):86.
. . Personalized Mapping of Drug Metabolism by the Human Gut Microbiome. Cell. 2020 ;181(7):1661-1679.e22.
. . Bacterial quorum sensing in complex and dynamically changing environments. Nat Rev Microbiol. 2019 ;17(6):371-382.
. Detection of Natural Products and Their Producers in Ocean Sediments. Appl Environ Microbiol. 2019 ;85(8).
. A metagenomic strategy for harnessing the chemical repertoire of the human microbiome. Science. 2019 ;366(6471).
. Of microbes and mange: consistent changes in the skin microbiome of three canid species infected with Sarcoptes scabiei mites. Parasit Vectors. 2019 ;12(1):488.
. The Small Intestine Converts Dietary Fructose into Glucose and Organic Acids. Cell Metab. 2018 ;27(2):351-361.e3.
. Discovery of Reactive Microbiota-Derived Metabolites that Inhibit Host Proteases. Cell. 2017 ;168(3):517-526.e18.
. Established Microbial Colonies Can Survive Type VI Secretion Assault. PLoS Comput Biol. 2015 ;11(10):e1004520.
. HUMAN MICROBIOTA. Small molecules from the human microbiota. Science. 2015 ;349(6246):1254766.
. Discovery and characterization of gut microbiota decarboxylases that can produce the neurotransmitter tryptamine. Cell Host Microbe. 2014 ;16(4):495-503.
. A systematic analysis of biosynthetic gene clusters in the human microbiome reveals a common family of antibiotics. Cell. 2014 ;158(6):1402-1414.
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