Publications
Age-related neurodegenerative disease associated pathways identified in retinal and vitreous proteome from human glaucoma eyes. Sci Rep. 2017 ;7(1):12685.
. The antiviral sirtuin 3 bridges protein acetylation to mitochondrial integrity and metabolism during human cytomegalovirus infection. PLoS Pathog. 2021 ;17(4):e1009506.
. Conservation and divergence of protein pathways in the vertebrate heart. PLoS Biol. 2019 ;17(9):e3000437.
. Contribution of Mass Spectrometry-Based Proteomics to Discoveries in Developmental Biology. Adv Exp Med Biol. 2019 ;1140:143-154.
. Differential nuclear import sets the timing of protein access to the embryonic genome. Nat Commun. 2022 ;13(1):5887.
. DNA methyltransferase DNMT3A associates with viral proteins and impacts HSV-1 infection. Proteomics. 2015 ;15(12):1968-82.
. Editorial overview: Untangling proteome organization in space and time. Curr Opin Chem Biol. 2019 ;48:A1-A4.
. Exploring and Exploiting Proteome Organization during Viral Infection. J Virol. 2017 ;91(18).
. Extracellular Vesicle and Particle Biomarkers Define Multiple Human Cancers. Cell. 2020 ;182(4):1044-1061.e18.
. Genome-Wide Detection and Analysis of Multifunctional Genes. PLoS Comput Biol. 2015 ;11(10):e1004467.
. Hdac4 Interactions in Huntington's Disease Viewed Through the Prism of Multiomics. Mol Cell Proteomics. 2019 ;18(8 suppl 1):S92-S113.
. A high-stringency blueprint of the human proteome. Nat Commun. 2020 ;11(1):5301.
. How many human proteoforms are there?. Nat Chem Biol. 2018 ;14(3):206-214.
. HTT-OMNI: A Web-based Platform for Huntingtin Interaction Exploration and Multi-omics Data Integration. Mol Cell Proteomics. 2022 ;21(10):100275.
. Human cytomegalovirus pUL97 kinase induces global changes in the infected cell phosphoproteome. Proteomics. 2015 ;15(12):2006-22.
. An Indexed, Mapped Mutant Library Enables Reverse Genetics Studies of Biological Processes in Chlamydomonas reinhardtii. Plant Cell. 2016 ;28(2):367-87.
. Interactome and Proteome Dynamics Uncover Immune Modulatory Associations of the Pathogen Sensing Factor cGAS. Cell Syst. 2018 ;7(6):627-642.e6.
. Mechanical Force Induces Phosphorylation-Mediated Signaling that Underlies Tissue Response and Robustness in Xenopus Embryos. Cell Syst. 2019 ;8(3):226-241.e7.
. Methods for characterizing protein acetylation during viral infection. Methods Enzymol. 2019 ;626:587-620.
. Mitochondrial Biogenesis and Proteome Remodeling Promote One-Carbon Metabolism for T Cell Activation. Cell Metab. 2016 ;24(1):104-17.
. The Nuclear Proteome of a Vertebrate. Curr Biol. 2015 ;25(20):2663-71.
. A Portrait of the Human Organelle Proteome In Space and Time during Cytomegalovirus Infection. Cell Syst. 2016 ;3(4):361-373.e6.
. Precise Temporal Regulation of Post-transcriptional Repressors Is Required for an Orderly Drosophila Maternal-to-Zygotic Transition. Cell Rep. 2020 ;31(12):107783.
. Progress Identifying and Analyzing the Human Proteome: 2021 Metrics from the HUPO Human Proteome Project. J Proteome Res. 2021 ;20(12):5227-5240.
. The Proteome of Preretinal Tissue in Proliferative Vitreoretinopathy. Ophthalmic Surg Lasers Imaging Retina. 2021 ;52(S1):S5-S12.
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