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A
Rutherford ST, van Kessel JC, Shao Y, Bassler BL. AphA and LuxR/HapR reciprocally control quorum sensing in vibrios. Genes Dev. 2011 ;25(4):397-408.
B
Sigoillot FD, Lyman S, Huckins JF, Adamson B, Chung E, Quattrochi B, et al. A bioinformatics method identifies prominent off-targeted transcripts in RNAi screens. Nat Methods. 2012 ;9(4):363-6.
C
Mallarino R, Campàs O, Fritz JA, Burns KJ, Weeks OG, Brenner MP, et al.. Closely related bird species demonstrate flexibility between beak morphology and underlying developmental programs. Proc Natl Acad Sci U S A. 2012 ;109(40):16222-7.
D
Hoegler KJ, Hecht MH. A de novo protein confers copper resistance in Escherichia coli. Protein Sci. 2016 ;25(7):1249-59.
Papenfort K, Förstner KU, Cong J-P, Sharma CM, Bassler BL. Differential RNA-seq of Vibrio cholerae identifies the VqmR small RNA as a regulator of biofilm formation. Proc Natl Acad Sci U S A. 2015 ;112(7):E766-75.
E
Oktaba K, Zhang W, Lotz TSabrina, Jun DJayhyun, Lemke SBeatrice, Ng SPak, et al. ELAV links paused Pol II to alternative polyadenylation in the Drosophila nervous system. Mol Cell. 2015 ;57(2):341-8.
F
M Madej G, Sun L, Yan N, H Kaback R. Functional architecture of MFS D-glucose transporters. Proc Natl Acad Sci U S A. 2014 ;111(7):E719-27.
H
Kwan JC, Tianero MDiarey B, Donia MS, Wyche TP, Bugni TS, Schmidt EW. Host control of symbiont natural product chemistry in cryptic populations of the tunicate Lissoclinum patella. PLoS One. 2014 ;9(5):e95850.
I
Bassler BL, Wright M, Showalter RE, Silverman MR. Intercellular signalling in Vibrio harveyi: sequence and function of genes regulating expression of luminescence. Mol Microbiol. 1993 ;9(4):773-86.
N
Svenningsen SL, Waters CM, Bassler BL. A negative feedback loop involving small RNAs accelerates Vibrio cholerae's transition out of quorum-sensing mode. Genes Dev. 2008 ;22(2):226-38.
Tu KC, Long T, Svenningsen SL, Wingreen NS, Bassler BL. Negative feedback loops involving small regulatory RNAs precisely control the Vibrio harveyi quorum-sensing response. Mol Cell. 2010 ;37(4):567-79.
Matthews BJ, McBride CS, DeGennaro M, Despo O, Vosshall LB. The neurotranscriptome of the Aedes aegypti mosquito. BMC Genomics. 2016 ;17:32.
O
DeGennaro M, McBride CS, Seeholzer L, Nakagawa T, Dennis EJ, Goldman C, et al. orco mutant mosquitoes lose strong preference for humans and are not repelled by volatile DEET. Nature. 2013 ;498(7455):487-91.
Q
Feng L, Rutherford ST, Papenfort K, Bagert JD, van Kessel JC, Tirrell DA, et al. A qrr noncoding RNA deploys four different regulatory mechanisms to optimize quorum-sensing dynamics. Cell. 2015 ;160(1-2):228-40.
Szwajkajzer D, Dai L, Fukayama JW, Abramczyk B, Fairman R, Carey J. Quantitative analysis of DNA binding by the Escherichia coli arginine repressor. J Mol Biol. 2001 ;312(5):949-62.
Shao Y, Bassler BL. Quorum-sensing non-coding small RNAs use unique pairing regions to differentially control mRNA targets. Mol Microbiol. 2012 ;83(3):599-611.
R
Deng D, Yin P, Yan C, Pan X, Gong X, Qi S, et al. Recognition of methylated DNA by TAL effectors. Cell Res. 2012 ;22(10):1502-4.
Xavier KB, Bassler BL. Regulation of uptake and processing of the quorum-sensing autoinducer AI-2 in Escherichia coli. J Bacteriol. 2005 ;187(1):238-48.
Hammer BK, Bassler BL. Regulatory small RNAs circumvent the conventional quorum sensing pathway in pandemic Vibrio cholerae. Proc Natl Acad Sci U S A. 2007 ;104(27):11145-9.
S
Bassler BL, Wright M, Silverman MR. Sequence and function of LuxO, a negative regulator of luminescence in Vibrio harveyi. Mol Microbiol. 1994 ;12(3):403-12.
Yin P, Deng D, Yan C, Pan X, Xi JJeff, Yan N, et al. Specific DNA-RNA hybrid recognition by TAL effectors. Cell Rep. 2012 ;2(4):707-13.