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2022
Weaver CJ, Patel AL, Shvartsman SY, Levine MS, Treen N. ERK signaling dissolves ERF repression condensates in living embryos. Proc Natl Acad Sci U S A. 2022 ;119(9).
Pérez-Núñez I, Rozalén C, Palomeque JÁngel, Sangrador I, Dalmau M, Comerma L, et al.. LCOR mediates interferon-independent tumor immunogenicity and responsiveness to immune-checkpoint blockade in triple-negative breast cancer. Nat Cancer. 2022 ;3(3):355-370.
Ibragimov AN, Bylino OV, Kyrchanova OV, Shidlovskii YV, White R, Schedl P, et al. The Variable CTCF Site from Drosophila melanogaster Ubx Gene is Redundant and Has no Insulator Activity. Dokl Biochem Biophys. 2022 ;505(1):173-175.
2021
Patel AL, Zhang L, Keenan SE, Rushlow CA, Fradin C, Shvartsman SY. Capicua is a fast-acting transcriptional brake. Curr Biol. 2021 ;31(16):3639-3647.e5.
Seath CP, Trowbridge AD, Muir TW, MacMillan DWC. Reactive intermediates for interactome mapping. Chem Soc Rev. 2021 ;50(5):2911-2926.
2020
Paul S, Yang L, Mattingly H, Goyal Y, Shvartsman SY, Veraksa A. Activation-induced substrate engagement in ERK signaling. Mol Biol Cell. 2020 ;31(4):235-243.
Guan D, Xiong Y, Trinh TMinh, Xiao Y, Hu W, Jiang C, et al. The hepatocyte clock and feeding control chronophysiology of multiple liver cell types. Science. 2020 ;369(6509):1388-1394.
McBride MJ, Mashtalir N, Winter EB, Dao HT, Filipovski M, D'Avino AR, et al. The nucleosome acidic patch and H2A ubiquitination underlie mSWI/SNF recruitment in synovial sarcoma. Nat Struct Mol Biol. 2020 ;27(9):836-845.
Cao WXi, Kabelitz S, Gupta M, Yeung E, Lin S, Rammelt C, et al. Precise Temporal Regulation of Post-transcriptional Repressors Is Required for an Orderly Drosophila Maternal-to-Zygotic Transition. Cell Rep. 2020 ;31(12):107783.
Keenan SE, Blythe SA, Marmion RA, Djabrayan NJ-V, Wieschaus EF, Shvartsman SY. Rapid Dynamics of Signal-Dependent Transcriptional Repression by Capicua. Dev Cell. 2020 ;52(6):794-801.e4.
Silpe JE, Bridges AA, Huang X, Coronado DR, Duddy OP, Bassler BL. Separating Functions of the Phage-Encoded Quorum-Sensing-Activated Antirepressor Qtip. Cell Host Microbe. 2020 ;27(4):629-641.e4.
2019
Silpe JE, Bassler BL. Phage-Encoded LuxR-Type Receptors Responsive to Host-Produced Bacterial Quorum-Sensing Autoinducers. mBio. 2019 ;10(2).
2018
Munro D, Ghersi D, Singh M. Two critical positions in zinc finger domains are heavily mutated in three human cancer types. PLoS Comput Biol. 2018 ;14(6):e1006290.
2017
Kyrchanova O, Zolotarev N, Mogila V, Maksimenko O, Schedl P, Georgiev P. Architectural protein Pita cooperates with dCTCF in organization of functional boundaries in Bithorax complex. Development. 2017 ;144(14):2663-2672.
Sacco SA, Adolfsen KJ, Brynildsen MP. An integrated network analysis identifies how ArcAB enables metabolic oscillations in the nitric oxide detoxification network of Escherichia coli. Biotechnol J. 2017 ;12(8).
Wang X, Paucek RD, Gooding AR, Brown ZZ, Ge EJ, Muir TW, et al. Molecular analysis of PRC2 recruitment to DNA in chromatin and its inhibition by RNA. Nat Struct Mol Biol. 2017 ;24(12):1028-1038.
Celià-Terrassa T, Liu DD, Choudhury A, Hang X, Wei Y, Zamalloa J, et al.. Normal and cancerous mammary stem cells evade interferon-induced constraint through the miR-199a-LCOR axis. Nat Cell Biol. 2017 ;19(6):711-723.
Hung G, Flint SJ. Normal human cell proteins that interact with the adenovirus type 5 E1B 55kDa protein. Virology. 2017 ;504:12-24.
Goyal Y, Levario TJ, Mattingly HH, Holmes S, Shvartsman SY, Lu H. Parallel imaging of embryos for quantitative analysis of genetic perturbations of the Ras pathway. Dis Model Mech. 2017 ;10(7):923-929.
Papenfort K, Silpe JE, Schramma KR, Cong J-P, Seyedsayamdost MR, Bassler BL. A Vibrio cholerae autoinducer-receptor pair that controls biofilm formation. Nat Chem Biol. 2017 ;13(5):551-557.
2016
Yang L, Paul S, Trieu KG, Dent LG, Froldi F, Forés M, et al.. Minibrain and Wings apart control organ growth and tissue patterning through down-regulation of Capicua. Proc Natl Acad Sci U S A. 2016 ;113(38):10583-8.
Degtjarik O, Brynda J, Ettrichova O, Kuty M, Sinha D, Smatanova IKuta, et al. Quantum Calculations Indicate Effective Electron Transfer between FMN and Benzoquinone in a New Crystal Structure of Escherichia coli WrbA. J Phys Chem B. 2016 ;120(22):4867-77.
Boyaci H, Shah T, Hurley A, Kokona B, Li Z, Ventocilla C, et al. Structure, Regulation, and Inhibition of the Quorum-Sensing Signal Integrator LuxO. PLoS Biol. 2016 ;14(5):e1002464.
Müller MM, Fierz B, Bittova L, Liszczak G, Muir TW. A two-state activation mechanism controls the histone methyltransferase Suv39h1. Nat Chem Biol. 2016 ;12(3):188-93.
2015
Truong TT, Seyedsayamdost M, E Greenberg P, Chandler JR. A Burkholderia thailandensis Acyl-Homoserine Lactone-Independent Orphan LuxR Homolog That Activates Production of the Cytotoxin Malleilactone. J Bacteriol. 2015 ;197(21):3456-62.