Ubiquitin utilizes an acidic surface patch to alter chromatin structure. Author Galia Debelouchina, Karola Gerecht, Tom Muir Publication Year 2017 Type Journal Article Abstract Ubiquitylation of histone H2B, associated with gene activation, leads to chromatin decompaction through an unknown mechanism. We used a hydrogen-deuterium exchange strategy coupled with NMR spectroscopy to map the ubiquitin surface responsible for its structural effects on chromatin. Our studies revealed that a previously uncharacterized acidic patch on ubiquitin comprising residues Glu16 and Glu18 is essential for decompaction. These residues mediate promiscuous electrostatic interactions with the basic histone proteins, potentially positioning the ubiquitin moiety as a dynamic 'wedge' that prevents the intimate association of neighboring nucleosomes. Using two independent crosslinking strategies and an oligomerization assay, we also showed that ubiquitin-ubiquitin contacts occur in the chromatin environment and are important for the solubilization of the chromatin polymers. Our work highlights a novel, chromatin-related aspect of the 'ubiquitin code' and sheds light on how the information-rich ubiquitin modification can orchestrate different biochemical outcomes using distinct surface features. Keywords Humans, Models, Molecular, Magnetic Resonance Spectroscopy, Surface Properties, Chromatin, Ubiquitin, Static Electricity, Deuterium Exchange Measurement Journal Nat Chem Biol Volume 13 Issue 1 Pages 105-110 Date Published 2017 Jan ISSN Number 1552-4469 DOI 10.1038/nchembio.2235 Alternate Journal Nat Chem Biol PMCID PMC5161692 PMID 27870837 PubMedPubMed CentralGoogle ScholarBibTeXEndNote X3 XML