New developments in RiPP discovery, enzymology and engineering. Author Manuel Montalbán-López, Thomas Scott, Sangeetha Ramesh, Imran Rahman, Auke van Heel, Jakob Viel, Vahe Bandarian, Elke Dittmann, Olga Genilloud, Yuki Goto, María Burgos, Colin Hill, Seokhee Kim, Jesko Koehnke, John Latham, A James Link, Beatriz Martínez, Satish Nair, Yvain Nicolet, Sylvie Rebuffat, Hans-Georg Sahl, Dipti Sareen, Eric Schmidt, Lutz Schmitt, Konstantin Severinov, Roderich Süssmuth, Andrew Truman, Huan Wang, Jing-Ke Weng, Gilles van Wezel, Qi Zhang, Jin Zhong, Jörn Piel, Douglas Mitchell, Oscar Kuipers, Wilfred van der Donk Publication Year 2021 Type Journal Article Abstract Covering: up to June 2020Ribosomally-synthesized and post-translationally modified peptides (RiPPs) are a large group of natural products. A community-driven review in 2013 described the emerging commonalities in the biosynthesis of RiPPs and the opportunities they offered for bioengineering and genome mining. Since then, the field has seen tremendous advances in understanding of the mechanisms by which nature assembles these compounds, in engineering their biosynthetic machinery for a wide range of applications, and in the discovery of entirely new RiPP families using bioinformatic tools developed specifically for this compound class. The First International Conference on RiPPs was held in 2019, and the meeting participants assembled the current review describing new developments since 2013. The review discusses the new classes of RiPPs that have been discovered, the advances in our understanding of the installation of both primary and secondary post-translational modifications, and the mechanisms by which the enzymes recognize the leader peptides in their substrates. In addition, genome mining tools used for RiPP discovery are discussed as well as various strategies for RiPP engineering. An outlook section presents directions for future research. Keywords Computational Biology, Phosphorylation, Protein Processing, Post-Translational, Enzymes, Methylation, Biological Products, Peptides, Ribosomes, Protein Sorting Signals, Protein Engineering, Hydroxylation Journal Nat Prod Rep Volume 38 Issue 1 Pages 130-239 Date Published 2021 Jan 01 ISSN Number 1460-4752 DOI 10.1039/d0np00027b Alternate Journal Nat Prod Rep PMCID PMC7864896 PMID 32935693 PubMedPubMed CentralGoogle ScholarBibTeXEndNote X3 XML