Maerker M, Getwan M, Dowdle M, McSheene J, Gonzalez V, Pelliccia J, Hamilton D, Yartseva V, Vejnar C, Tingler M, Minegishi K, Vick P, Giraldez A, Hamada H, Burdine R, Sheets M, Blum M, Schweickert A. Bicc1 and Dicer regulate left-right patterning through post-transcriptional control of the Nodal inhibitor Dand5. Nat Commun. 2021;12(1):5482. PMCID: PMC8446035

Cofer E, Raimundo J, Tadych A, Yamazaki Y, Wong A, Theesfeld C, Levine M, Troyanskaya O. Modeling transcriptional regulation of model species with deep learning. Genome Res. 2021;31(6):1097–1105. PMCID: PMC8168591

Patterson V, Burdine R. Swimming toward solutions: Using fish and frogs as models for understanding RASopathies. Birth Defects Res. 2020;112(10):749–765. PMCID: PMC7968373

Grimes D, Patterson V, Luna-Arvizu G, Schottenfeld-Roames J, Irons Z, Burdine R. Left-right asymmetric heart jogging increases the robustness of dextral heart looping in zebrafish. Dev Biol. 2020;459(2):79–86. PMID: 31758943

Patel A, Yeung E, McGuire S, Wu A, Toettcher J, Burdine R, Shvartsman S. Optimizing photoswitchable MEK. Proc Natl Acad Sci U S A. 2019;116(51):25756–25763. PMCID: PMC6926043

Giovannucci A, Friedrich J, Gunn P, Kalfon J, Brown B, Koay S, Taxidis J, Najafi F, Gauthier J, Zhou P, Khakh B, Tank D, Chklovskii D, Pnevmatikakis E. CaImAn an open source tool for scalable calcium imaging data analysis. Elife. 2019;8. PMCID: PMC6342523

Harris A, Siggers P, Corrochano S, Warr N, Sagar D, Grimes D, Suzuki M, Burdine R, Cong F, Koo B-K, Clevers H, Stévant I, Nef S, Wells S, Brauner R, Ben Rhouma B, Belguith N, Eozenou C, Bignon-Topalovic J, Bashamboo A, McElreavey K, Greenfield A. ZNRF3 functions in mammalian sex determination by inhibiting canonical WNT signaling. Proc Natl Acad Sci U S A. 2018;115(21):5474–5479. PMCID: PMC6003506

Pierre A, Sallé J, Wühr M, Minc N. Generic Theoretical Models to Predict Division Patterns of Cleaving Embryos. Dev Cell. 2016;39(6):667–682. PMCID: PMC5180451

Pelliccia J, Jindal G, Burdine R. Gdf3 is required for robust Nodal signaling during germ layer formation and left-right patterning. Elife. 2017;6. PMCID: PMC5745080

Jindal G, Goyal Y, Humphreys J, Yeung E, Tian K, Patterson V, He H, Burdine R, Goldsmith E, Shvartsman S. How activating mutations affect MEK1 regulation and function. J Biol Chem. 2017;292(46):18814–18820. PMCID: PMC5704466

Stainier D, Raz E, Lawson N, Ekker S, Burdine R, Eisen J, Ingham P, Schulte-Merker S, Yelon D, Weinstein B, Mullins M, Wilson S, Ramakrishnan L, Amacher S, Neuhauss S, Meng A, Mochizuki N, Panula P, Moens C. Guidelines for morpholino use in zebrafish. PLoS Genet. 2017;13(10):e1007000. PMCID: PMC5648102

Lu Y, Xie S, Zhang W, Zhang C, Gao C, Sun Q, Cai Y, Xu Z, Xiao M, Xu Y, Huang X, Wu X, Liu W, Wang F, Kang Y, Zhou T. Twa1/Gid8 is a β-catenin nuclear retention factor in Wnt signaling and colorectal tumorigenesis. Cell Res. 2017;27(12):1422–1440. PMCID: PMC5717399

Grant M, Patterson V, Grimes D, Burdine R. Modeling Syndromic Congenital Heart Defects in Zebrafish. Curr Top Dev Biol. 2017;124:1–40. PMID: 28335857

Goyal Y, Jindal G, Pelliccia J, Yamaya K, Yeung E, Futran A, Burdine R, Schüpbach T, Shvartsman S. Divergent effects of intrinsically active MEK variants on developmental Ras signaling. Nat Genet. 2017;49(3):465–469. PMCID: PMC5621734

Burdine R, Grimes D. Antagonistic interactions in the zebrafish midline prior to the emergence of asymmetric gene expression are important for left-right patterning. Philos Trans R Soc Lond B Biol Sci. 2016;371(1710). PMCID: PMC5104502

Jindal G, Goyal Y, Yamaya K, Futran A, Kountouridis I, Balgobin C, Schüpbach T, Burdine R, Shvartsman S. In vivo severity ranking of Ras pathway mutations associated with developmental disorders. Proc Natl Acad Sci U S A. 2017;114(3):510–515. PMCID: PMC5255624

Nelson C. Choreographing tissue morphogenesis. Semin Cell Dev Biol. 2016;55:79. PMID: 27288887

Wühr M, Tan E, Parker S, Detrich W, Mitchison T. A model for cleavage plane determination in early amphibian and fish embryos. Curr Biol. 2010;20(22):2040–5. PMCID: PMC3031131

Hjeij R, Onoufriadis A, Watson C, Slagle C, Klena N, Dougherty G, Kurkowiak M, Loges N, Diggle C, Morante N, Gabriel G, Lemke K, Li Y, Pennekamp P, Menchen T, Konert F, Marthin J, Mans D, Letteboer S, Werner C, Burgoyne T, Westermann C, Rutman A, Carr I, O’Callaghan C, Moya E, Chung E, UK10K Consortium, Sheridan E, Nielsen K, Roepman R, Bartscherer K, Burdine R, Lo C, Omran H, Mitchison H. CCDC151 mutations cause primary ciliary dyskinesia by disruption of the outer dynein arm docking complex formation. Am J Hum Genet. 2014;95(3):257–74. PMCID: PMC4157146

Grimes D, Boswell C, Morante N, Henkelman R, Burdine R, Ciruna B. Zebrafish models of idiopathic scoliosis link cerebrospinal fluid flow defects to spine curvature. Science. 2016;352(6291):1341–4. PMCID: PMC5574193

Kim C, Miri A, Leung L, Berndt A, Mourrain P, Tank D, Burdine R. Prolonged, brain-wide expression of nuclear-localized GCaMP3 for functional circuit mapping. Front Neural Circuits. 2014;8:138. PMCID: PMC4244806

Jaffe K, Grimes D, Schottenfeld-Roames J, Werner M, Ku T-S, Kim S, Pelliccia J, Morante N, Mitchell B, Burdine R. c21orf59/kurly Controls Both Cilia Motility and Polarization. Cell Rep. 2016;14(8):1841–9. PMCID: PMC4775428