1.Taylor I, Murray-Nerger L, Greco T, Liu D, Cristea I, Bassler B. Protein Interaction Networks of Catalytically Active and Catalytically Inactive PqsE in Pseudomonas aeruginosa. mBio. 2022;13(5):e0155922. PMCID: PMC9600345 Reference Link
1.Pareek V, Sha Z, He J, Wingreen N, Benkovic S. Metabolic channeling: predictions, deductions, and evidence. Mol Cell. 2021;81(18):3775–3785. PMCID: PMC8485759 Reference Link
1.Seath C, Trowbridge A, Muir T, MacMillan D. Reactive intermediates for interactome mapping. Chem Soc Rev. 2021;50(5):2911–2926. PMID: 33458734 Reference Link
1.Federspiel J, Cook K, Kennedy M, Venkatesh S, Otter C, Hofstadter W, Beltran P, Cristea I. Mitochondria and Peroxisome Remodeling across Cytomegalovirus Infection Time Viewed through the Lens of Inter-ViSTA. Cell Rep. 2020;32(4):107943. PMCID: PMC8489195 Reference Link
1.Hristov B, Chazelle B, Singh M. uKIN Combines New and Prior Information with Guided Network Propagation to Accurately Identify Disease Genes. Cell Syst. 2020;10(6):470–479.e3. PMCID: PMC7821437 Reference Link
1.Tareen A, Wingreen N, Mukhopadhyay R. Asymmetry between Activators and Deactivators in Functional Protein Networks. Sci Rep. 2020;10(1):10131. PMCID: PMC7311538 Reference Link
1.Sanders D, Kedersha N, Lee D, Strom A, Drake V, Riback J, Bracha D, Eeftens J, Iwanicki A, Wang A, Wei M-T, Whitney G, Lyons S, Anderson P, Jacobs W, Ivanov P, Brangwynne C. Competing Protein-RNA Interaction Networks Control Multiphase Intracellular Organization. Cell. 2020;181(2):306–324.e28. PMCID: PMC7816278 Reference Link
1.Hashimoto Y, Sheng X, Murray-Nerger L, Cristea I. Temporal dynamics of protein complex formation and dissociation during human cytomegalovirus infection. Nat Commun. 2020;11(1):806. PMCID: PMC7010728 Reference Link
1.Durán A, Greco T, Vollmer B, Cristea I, Grünewald K, Topf M. Protein interactions and consensus clustering analysis uncover insights into herpesvirus virion structure and function relationships. PLoS Biol. 2019;17(6):e3000316. PMCID: PMC6594648 Reference Link
1.Goglia A, Toettcher J. A bright future: optogenetics to dissect the spatiotemporal control of cell behavior. Curr Opin Chem Biol. 2019;48:106–113. PMCID: PMC6382565 Reference Link
1.Cristea I, Lilley K. Editorial overview: Untangling proteome organization in space and time. Curr Opin Chem Biol. 2019;48:A1-A4. PMID: 30782346 Reference Link
1.Nguyen T, Pappireddi N, Wühr M. Proteomics of nucleocytoplasmic partitioning. Curr Opin Chem Biol. 2019;48:55–63. PMCID: PMC6382543 Reference Link
1.Lum K, Song B, Federspiel J, Diner B, Howard T, Cristea I. Interactome and Proteome Dynamics Uncover Immune Modulatory Associations of the Pathogen Sensing Factor cGAS. Cell Syst. 2018;7(6):627–642.e6. PMCID: PMC6310102 Reference Link
1.Cook K, Cristea I. Location is everything: protein translocations as a viral infection strategy. Curr Opin Chem Biol. 2019;48:34–43. PMCID: PMC6382524 Reference Link
1.Gong X, Qian H, Cao P, Zhao X, Zhou Q, Lei J, Yan N. Structural basis for the recognition of Sonic Hedgehog by human Patched1. Science. 2018;361(6402). PMID: 29954986 Reference Link
1.Ali M, Wingreen N, Mukhopadhyay R. Hidden long evolutionary memory in a model biochemical network. Phys Rev E. 2018;97(4-1):040401. PMCID: PMC5973509 Reference Link
1.Mirzaei M, Gupta V, Chick J, Greco T, Wu Y, Chitranshi N, Wall R, Hone E, Deng L, Dheer Y, Abbasi M, Rezaeian M, Braidy N, You Y, Salekdeh G, Haynes P, Molloy M, Martins R, Cristea I, Gygi S, Graham S, Gupta V. Age-related neurodegenerative disease associated pathways identified in retinal and vitreous proteome from human glaucoma eyes. Sci Rep. 2017;7(1):12685. PMCID: PMC5627288 Reference Link
1.Hristov B, Singh M. Network-Based Coverage of Mutational Profiles Reveals Cancer Genes. Cell Syst. 2017;5(3):221–229.e4. PMCID: PMC5997485 Reference Link
1.Crow M, Cristea I. Human Antiviral Protein IFIX Suppresses Viral Gene Expression during Herpes Simplex Virus 1 (HSV-1) Infection and Is Counteracted by Virus-induced Proteasomal Degradation. Mol Cell Proteomics. 2017;16(4 suppl 1):S200-S214. PMCID: PMC5393386 Reference Link
1.Ashford P, Hernandez A, Greco T, Buch A, Sodeik B, Cristea I, Grünewald K, Shepherd A, Topf M. HVint: A Strategy for Identifying Novel Protein-Protein Interactions in Herpes Simplex Virus Type 1. Mol Cell Proteomics. 2016;15(9):2939–53. PMCID: PMC5013309 Reference Link
1.Shin Y, Berry J, Pannucci N, Haataja M, Toettcher J, Brangwynne C. Spatiotemporal Control of Intracellular Phase Transitions Using Light-Activated optoDroplets. Cell. 2017;168(1-2):159–171.e14. PMCID: PMC5562165 Reference Link
1.Budayeva H, Cristea I. Human Sirtuin 2 Localization, Transient Interactions, and Impact on the Proteome Point to Its Role in Intracellular Trafficking. Mol Cell Proteomics. 2016;15(10):3107–3125. PMCID: PMC5054338 Reference Link
1.Bitbol A-F, Dwyer R, Colwell L, Wingreen N. Inferring interaction partners from protein sequences. Proc Natl Acad Sci U S A. 2016;113(43):12180–12185. PMCID: PMC5087060 Reference Link
1.Gorenshteyn D, Zaslavsky E, Fribourg M, Park C, Wong A, Tadych A, Hartmann B, Albrecht R, García-Sastre A, Kleinstein S, Troyanskaya O, Sealfon S. Interactive Big Data Resource to Elucidate Human Immune Pathways and Diseases. Immunity. 2015;43(3):605–14. PMCID: PMC4753773 Reference Link
1.Greco T, Cristea I. The Biochemical Evolution of Protein Complexes. Trends Biochem Sci. 2016;41(1):4–6. PMCID: PMC4706493 Reference Link
