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Polymorphism, Single Nucleotide

  • 1.
    Ochoa A, Storey J. Estimating FST and kinship for arbitrary population structures. PLoS Genet. 2021;17(1):e1009241. PMCID: PMC7846127
    Reference Link
  • 1.
    Park C, Zhou J, Wong A, Chen K, Theesfeld C, Darnell R, Troyanskaya O. Genome-wide landscape of RNA-binding protein target site dysregulation reveals a major impact on psychiatric disorder risk. Nat Genet. 2021;53(2):166–173. PMCID: PMC7886016
    Reference Link
  • 1.
    Myhrvold C, Freije C, Gootenberg J, Abudayyeh O, Metsky H, Durbin A, Kellner M, Tan A, Paul L, Parham L, Garcia K, Barnes K, Chak B, Mondini A, Nogueira M, Isern S, Michael S, Lorenzana I, Yozwiak N, MacInnis B, Bosch I, Gehrke L, Zhang F, Sabeti P. Field-deployable viral diagnostics using CRISPR-Cas13. Science. 2018;360(6387):444–448. PMCID: PMC6197056
    Reference Link
  • 1.
    vonHoldt B, DeCandia A, Heppenheimer E, Janowitz-Koch I, Shi R, Zhou H, German C, Brzeski K, Cassidy K, Stahler D, Sinsheimer J. Heritability of interpack aggression in a wild pedigreed population of North American grey wolves. Mol Ecol. 2020;29(10):1764–1775. PMCID: PMC7299816
    Reference Link
  • 1.
    MacLean E, Snyder-Mackler N, vonHoldt B, Serpell J. Highly heritable and functionally relevant breed differences in dog behaviour. Proc Biol Sci. 2019;286(1912):20190716. PMCID: PMC6790757
    Reference Link
  • 1.
    Shrine N, Guyatt A, Erzurumluoglu M, Jackson V, Hobbs B, Melbourne C, Batini C, Fawcett K, Song K, Sakornsakolpat P, Li X, Boxall R, Reeve N, Obeidat M, Zhao J, Wielscher M, Weiss S, Kentistou K, Cook J, Sun B, Zhou J, Hui J, Karrasch S, Imboden M, Harris S, Marten J, Enroth S, Kerr S, Surakka I, Vitart V, Lehtimäki T, Allen R, Bakke P, Beaty T, Bleecker E, Bossé Y, Brandsma C-A, Chen Z, Crapo J, Danesh J, DeMeo D, Dudbridge F, Ewert R, Gieger C, Gulsvik A, Hansell A, Hao K, Hoffman J, Hokanson J, Homuth G, Joshi P, Joubert P, Langenberg C, Li X, Li L, Lin K, Lind L, Locantore N, Luan J, Mahajan A, Maranville J, Murray A, Nickle D, Packer R, Parker M, Paynton M, Porteous D, Prokopenko D, Qiao D, Rawal R, Runz H, Sayers I, Sin D, Smith B, Artigas M, Sparrow D, Tal-Singer R, Timmers P, Van den Berge M, Whittaker J, Woodruff P, Yerges-Armstrong L, Troyanskaya O, Raitakari O, Kähönen M, Polašek O, Gyllensten U, Rudan I, Deary I, Probst-Hensch N, Schulz H, James A, Wilson J, Stubbe B, Zeggini E, Jarvelin M-R, Wareham N, Silverman E, Hayward C, Morris A, Butterworth A, Scott R, Walters R, Meyers D, Cho M, Strachan D, Hall I, Tobin M, Wain L, Understanding Society Scientific Group. New genetic signals for lung function highlight pathways and chronic obstructive pulmonary disease associations across multiple ancestries. Nat Genet. 2019;51(3):481–493. PMCID: PMC6397078
    Reference Link
  • 1.
    Zhou J, Theesfeld C, Yao K, Chen K, Wong A, Troyanskaya O. Deep learning sequence-based ab initio prediction of variant effects on expression and disease risk. Nat Genet. 2018;50(8):1171–1179. PMCID: PMC6094955
    Reference Link
  • 1.
    Kim H, Raffler J, Lu W, Lee J-J, Abbey D, Saleheen D, Rabinowitz J, Bennett M, Hand N, Brown C, Rader D. Fine Mapping and Functional Analysis Reveal a Role of SLC22A1 in Acylcarnitine Transport. Am J Hum Genet. 2017;101(4):489–502. PMCID: PMC5630162
    Reference Link
  • 1.
    vonHoldt B, Shuldiner E, Koch I, Kartzinel R, Hogan A, Brubaker L, Wanser S, Stahler D, Wynne C, Ostrander E, Sinsheimer J, Udell M. Structural variants in genes associated with human Williams-Beuren syndrome underlie stereotypical hypersociability in domestic dogs. Sci Adv. 2017;3(7):e1700398. PMCID: PMC5517105
    Reference Link
  • 1.
    vonHoldt B, Kays R, Pollinger J, Wayne R. Admixture mapping identifies introgressed genomic regions in North American canids. Mol Ecol. 2016;25(11):2443–53. PMID: 27106273
    Reference Link
  • 1.
    Gopalan P, Hao W, Blei D, Storey J. Scaling probabilistic models of genetic variation to millions of humans. Nat Genet. 2016;48(12):1587–1590. PMCID: PMC5127768
    Reference Link
  • 1.
    Smith H, White B, Kundert P, Cheng C, Romero-Severson J, Andolfatto P, Besansky N. Genome-wide QTL mapping of saltwater tolerance in sibling species of Anopheles (malaria vector) mosquitoes. Heredity (Edinb). 2015;115(5):471–9. PMCID: PMC4611235
    Reference Link
  • 1.
    Krishnan A, Zhang R, Yao V, Theesfeld C, Wong A, Tadych A, Volfovsky N, Packer A, Lash A, Troyanskaya O. Genome-wide prediction and functional characterization of the genetic basis of autism spectrum disorder. Nat Neurosci. 2016;19(11):1454–1462. PMCID: PMC5803797
    Reference Link
  • 1.
    vonHoldt B, Pollinger J, Earl D, Knowles J, Boyko A, Parker H, Geffen E, Pilot M, Jedrzejewski W, Jedrzejewska B, Sidorovich V, Greco C, Randi E, Musiani M, Kays R, Bustamante C, Ostrander E, Novembre J, Wayne R. A genome-wide perspective on the evolutionary history of enigmatic wolf-like canids. Genome Res. 2011;21(8):1294–305. PMCID: PMC3149496
    Reference Link
  • 1.
    Fredrickson R, Hedrick P, Wayne R, vonHoldt B, Phillips M. Mexican Wolves Are a Valid Subspecies and an Appropriate Conservation Target. J Hered. 2015;106(4):415–6. PMID: 25964445
    Reference Link
  • 1.
    Schweizer R, vonHoldt B, Harrigan R, Knowles J, Musiani M, Coltman D, Novembre J, Wayne R. Genetic subdivision and candidate genes under selection in North American grey wolves. Mol Ecol. 2016;25(1):380–402. PMID: 26333947
    Reference Link
  • 1.
    Zhou J, Troyanskaya O. Predicting effects of noncoding variants with deep learning-based sequence model. Nat Methods. 2015;12(10):931–4. PMCID: PMC4768299
    Reference Link
  • 1.
    Song M, Hao W, Storey J. Testing for genetic associations in arbitrarily structured populations. Nat Genet. 2015;47(5):550–4. PMCID: PMC4464830
    Reference Link
  • 1.
    Rogers R, Cridland J, Shao L, Hu T, Andolfatto P, Thornton K. Tandem Duplications and the Limits of Natural Selection in Drosophila yakuba and Drosophila simulans. PLoS One. 2015;10(7):e0132184. PMCID: PMC4503668
    Reference Link

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