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Models, Statistical

  • 1.
    Verma A, Jena S, Isakov D, Aoki K, Toettcher J, Engelhardt B. A self-exciting point process to study multicellular spatial signaling patterns. Proc Natl Acad Sci U S A. 2021;118(32). PMCID: PMC8364135
    Reference Link
  • 1.
    Chen K, Cofer E, Zhou J, Troyanskaya O. Selene: a PyTorch-based deep learning library for sequence data. Nat Methods. 2019;16(4):315–318. PMCID: PMC7148117
    Reference Link
  • 1.
    Hao W, Song M, Storey J. Probabilistic models of genetic variation in structured populations applied to global human studies. Bioinformatics. 2016;32(5):713–21. PMCID: PMC4795615
    Reference Link
  • 1.
    Ochoa A, Singh M. Domain prediction with probabilistic directional context. Bioinformatics. 2017;33(16):2471–2478. PMCID: PMC5870623
    Reference Link
  • 1.
    Prentice J, Marre O, Ioffe M, Loback A, Tkačik G, Berry M. Error-Robust Modes of the Retinal Population Code. PLoS Comput Biol. 2016;12(11):e1005148. PMCID: PMC5113862
    Reference Link
  • 1.
    Gopalan P, Hao W, Blei D, Storey J. Scaling probabilistic models of genetic variation to millions of humans. Nat Genet. 2016;48(12):1587–1590. PMCID: PMC5127768
    Reference Link
  • 1.
    Snir S, vonHoldt B, Pellegrini M. A Statistical Framework to Identify Deviation from Time Linearity in Epigenetic Aging. PLoS Comput Biol. 2016;12(11):e1005183. PMCID: PMC5106012
    Reference Link
  • 1.
    Kang Y, Lee J, Kang J, Kim G, Kim T. Analysis of Longitudinal Outcome Data with Missing Values in Total Knee Arthroplasty. J Arthroplasty. 2016;31(1):81–6. PMID: 26248852
    Reference Link
  • 1.
    Zhou J, Troyanskaya O. Probabilistic modelling of chromatin code landscape reveals functional diversity of enhancer-like chromatin states. Nat Commun. 2016;7:10528. PMCID: PMC4742914
    Reference Link
  • 1.
    Chung N, Storey J. Statistical significance of variables driving systematic variation in high-dimensional data. Bioinformatics. 2015;31(4):545–54. PMCID: PMC4325543
    Reference Link
  • 1.
    Ochoa A, Storey J, Llinás M, Singh M. Beyond the E-Value: Stratified Statistics for Protein Domain Prediction. PLoS Comput Biol. 2015;11(11):e1004509. PMCID: PMC4648515
    Reference Link
  • 1.
    Tkačik G, Mora T, Marre O, Amodei D, Palmer S, Berry M, Bialek W. Thermodynamics and signatures of criticality in a network of neurons. Proc Natl Acad Sci U S A. 2015;112(37):11508–13. PMCID: PMC4577210
    Reference Link

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