1.Sauerwald N, Zhang Z, Ramos I, Nair V, Soares-Schanoski A, Ge Y, Mao W, Alshammary H, Gonzalez-Reiche A, van de Guchte A, Goforth C, Lizewski R, Lizewski S, Amper M, Vasoya M, Seenarine N, Guevara K, Marjanovic N, Miller C, Nudelman G, Schilling M, Sealfon R, Termini M, Vangeti S, Weir D, Zaslavsky E, Chikina M, Wu Y, van Bakel H, Letizia A, Sealfon S, Troyanskaya O. Pre-infection antiviral innate immunity contributes to sex differences in SARS-CoV-2 infection. Cell Syst. 2022;13(11):924–931.e4. PMCID: PMC9623453 Reference Link
1.Caragiulo A, Gaughran S, Duncan N, Nagy C, Weckel M, vonHoldt B. Coyotes in New York City Carry Variable Genomic Dog Ancestry and Influence Their Interactions with Humans. Genes (Basel). 2022;13(9). PMCID: PMC9498729 Reference Link
1.Lizewski R, Sealfon R, Park S, Smith G, Porter C, Gonzalez-Reiche A, Ge Y, Miller C, Goforth C, Pincas H, Termini M, Ramos I, Nair V, Lizewski S, Alshammary H, Cer R, Chen H, George M-C, Arnold C, Glang L, Long K, Malagon F, Marayag J, Nunez E, Rice G, Ana E, Schilling M, Smith D, Sugiharto V, Sun P, van de Guchte A, Khan Z, Dutta J, Vangeti S, Voegtly L, Weir D, Metcalf J, Troyanskaya O, Bishop-Lilly K, Grenfell B, van Bakel H, Letizia A, Sealfon S. SARS-CoV-2 Outbreak Dynamics in an Isolated US Military Recruit Training Center With Rigorous Prevention Measures. Epidemiology. 2022;33(6):797–807. PMCID: PMC9531985 Reference Link
1.Lim A, Menegatti S, Bustamante J, Le Bourhis L, Allez M, Rogge L, Casanova J-L, Yssel H, Di Santo J. IL-12 drives functional plasticity of human group 2 innate lymphoid cells. J Exp Med. 2016;213(4):569–83. PMCID: PMC4821648 Reference Link
1.Lindell R, Zhang D, Bush J, Wallace D, Rabinowitz J, Lu W, Wherry J, Weiss S, Henrickson S. Impaired Lymphocyte Responses in Pediatric Sepsis Vary by Pathogen Type and are Associated with Features of Immunometabolic Dysregulation. Shock. 2022;57(6):191–199. PMCID: PMC9245144 Reference Link
1.ICU-RESUS and Eunice Kennedy Shriver National Institute of Child Health, Human Development Collaborative Pediatric Critical Care Research Network Investigator Groups, Sutton R, Wolfe H, Reeder R, Ahmed T, Bishop R, Bochkoris M, Burns C, Diddle W, Federman M, Fernandez R, Franzon D, Frazier A, Friess S, Graham K, Hehir D, Horvat C, Huard L, Landis W, Maa T, Manga A, Morgan R, Nadkarni V, Naim M, Palmer C, Schneiter C, Sharron M, Siems A, Srivastava N, Tabbutt S, Tilford B, Viteri S, Berg R, Bell M, Carcillo J, Carpenter T, Dean M, Fink E, Hall M, McQuillen P, Meert K, Mourani P, Notterman D, Pollack M, Sapru A, Wessel D, Yates A, Zuppa A. Effect of Physiologic Point-of-Care Cardiopulmonary Resuscitation Training on Survival With Favorable Neurologic Outcome in Cardiac Arrest in Pediatric ICUs: A Randomized Clinical Trial. JAMA. 2022;327(10):934–945. PMCID: PMC8905390 Reference Link
1.Klibaite U, Kislin M, Verpeut J, Bergeler S, Sun X, Shaevitz J, Wang S. Deep phenotyping reveals movement phenotypes in mouse neurodevelopmental models. Mol Autism. 2022;13(1):12. PMCID: PMC8917660 Reference Link
1.Zhang Z, Zamojski M, Smith G, Willis T, Yianni V, Mendelev N, Pincas H, Seenarine N, Amper M, Vasoya M, Cheng W, Zaslavsky E, Nair V, Turgeon J, Bernard D, Troyanskaya O, Andoniadou C, Sealfon S, Ruf-Zamojski F. Single nucleus transcriptome and chromatin accessibility of postmortem human pituitaries reveal diverse stem cell regulatory mechanisms. Cell Rep. 2022;38(10):110467. PMCID: PMC8957708 Reference Link
1.Pisano T, Dhanerawala Z, Kislin M, Bakshinskaya D, Engel E, Hansen E, Hoag A, Lee J, de Oude N, Venkataraju K, Verpeut J, Hoebeek F, Richardson B, Boele H-J, Wang S. Homologous organization of cerebellar pathways to sensory, motor, and associative forebrain. Cell Rep. 2021;36(12):109721. PMCID: PMC8506234 Reference Link
1.Wang L, Xing X, Zeng X, Jackson R, TeSlaa T, Al-Dalahmah O, Samarah L, Goodwin K, Yang L, McReynolds M, Li X, Wolff J, Rabinowitz J, Davidson S. Spatially resolved isotope tracing reveals tissue metabolic activity. Nat Methods. 2022;19(2):223–230. PMID: 35132243 Reference Link
1.Li X, Hui S, Mirek E, Jonsson W, Anthony T, Lee W, Zeng X, Jang C, Rabinowitz J. Circulating metabolite homeostasis achieved through mass action. Nat Metab. 2022;4(1):141–152. PMCID: PMC9244777 Reference Link
1.Colonnetta M, Goyal Y, Johnson H, Syal S, Schedl P, Deshpande G. Preformation and epigenesis converge to specify primordial germ cell fate in the early Drosophila embryo. PLoS Genet. 2022;18(1):e1010002. PMCID: PMC8765614 Reference Link
1.Zhang Z, TeSlaa T, Xu X, Zeng X, Yang L, Xing G, Tesz G, Clasquin M, Rabinowitz J. Serine catabolism generates liver NADPH and supports hepatic lipogenesis. Nat Metab. 2021;3(12):1608–1620. PMCID: PMC8721747 Reference Link
1.Shi W, Sheng X, Dorr K, Hutton J, Emerson J, Davies H, Andrade T, Wasson L, Greco T, Hashimoto Y, Federspiel J, Robbe Z, Chen X, Arnold A, Cristea I, Conlon F. Cardiac proteomics reveals sex chromosome-dependent differences between males and females that arise prior to gonad formation. Dev Cell. 2021;56(21):3019–3034.e7. PMCID: PMC9290207 Reference Link
1.Chen P, Hussmann J, Yan J, Knipping F, Ravisankar P, Chen P-F, Chen C, Nelson J, Newby G, Sahin M, Osborn M, Weissman J, Adamson B, Liu D. Enhanced prime editing systems by manipulating cellular determinants of editing outcomes. Cell. 2021;184(22):5635–5652.e29. PMCID: PMC8584034 Reference Link
1.García-Cañaveras J, Heo D, Trefely S, Leferovich J, Xu C, Philipson B, Ghassemi S, Milone M, Moon E, Snyder N, June C, Rabinowitz J, O’Connor R. CAR T-Cells Depend on the Coupling of NADH Oxidation with ATP Production. Cells. 2021;10(9). PMCID: PMC8472053 Reference Link
1.Joyce B, Gao T, Koss K, Zheng Y, Cardenas A, Heiss J, Just A, Zhang K, van Horn L, Allen N, Greenland P, Cohen S, Gordon-Larsen P, Mitchell C, McLanahan S, Schneper L, Notterman D, Rifas-Shiman S, Oken E, Hivert M-F, Wright R, Baccarelli A, Lloyd-Jones D, Hou L. Impact of paternal education on epigenetic ageing in adolescence and mid-adulthood: a multi-cohort study in the USA and Mexico. Int J Epidemiol. 2022;51(3):870–884. PMCID: PMC9189973 Reference Link
1.Zhang R, Lee D, Jimah J, Gerassimov N, Yang C, Kim S, Luvsanjav D, Winkelman J, Mettlen M, Abrams M, Kalia R, Keene P, Pandey P, Ravaux B, Kim J, Ditlev J, Zhang G, Rosen M, Frost A, Alto N, Gardel M, Schmid S, Svitkina T, Hinshaw J, Chen E. Dynamin regulates the dynamics and mechanical strength of the actin cytoskeleton as a multifilament actin-bundling protein. Nat Cell Biol. 2020;22(6):674–688. PMCID: PMC7953826 Reference Link
1.Sochacki K, Heine B, Haber G, Jimah J, Prasai B, Alfonzo-Méndez M, Roberts A, Somasundaram A, Hinshaw J, Taraska J. The structure and spontaneous curvature of clathrin lattices at the plasma membrane. Dev Cell. 2021;56(8):1131–1146.e3. PMCID: PMC8081270 Reference Link
1.Bredemeyer K, Seabury C, Stickney M, McCarrey J, vonHoldt B, Murphy W. Rapid Macrosatellite Evolution Promotes X-Linked Hybrid Male Sterility in a Feline Interspecies Cross. Mol Biol Evol. 2021;38(12):5588–5609. PMCID: PMC8662614 Reference Link
1.Rose N, Sylla M, Badolo A, Lutomiah J, Ayala D, Aribodor O, Ibe N, Akorli J, Otoo S, Mutebi J-P, Kriete A, Ewing E, Sang R, Gloria-Soria A, Powell J, Baker R, White B, Crawford J, McBride C. Climate and Urbanization Drive Mosquito Preference for Humans. Curr Biol. 2020;30(18):3570–3579.e6. PMCID: PMC7511451 Reference Link
1.Matthews B, Dudchenko O, Kingan S, Koren S, Antoshechkin I, Crawford J, Glassford W, Herre M, Redmond S, Rose N, Weedall G, Wu Y, Batra S, Brito-Sierra C, Buckingham S, Campbell C, Chan S, Cox E, Evans B, Fansiri T, Filipović I, Fontaine A, Gloria-Soria A, Hall R, Joardar V, Jones A, Kay R, Kodali V, Lee J, Lycett G, Mitchell S, Muehling J, Murphy M, Omer A, Partridge F, Peluso P, Aiden A, Ramasamy V, Rašić G, Roy S, Saavedra-Rodriguez K, Sharan S, Sharma A, Smith M, Turner J, Weakley A, Zhao Z, Akbari O, Black W, Cao H, Darby A, Hill C, Johnston S, Murphy T, Raikhel A, Sattelle D, Sharakhov I, White B, Zhao L, Aiden E, Mann R, Lambrechts L, Powell J, Sharakhova M, Tu Z, Robertson H, McBride C, Hastie A, Korlach J, Neafsey D, Phillippy A, Vosshall L. Improved reference genome of Aedes aegypti informs arbovirus vector control. Nature. 2018;563(7732):501–507. PMCID: PMC6421076 Reference Link
1.Gilmutdinov R, Kozlov E, Yakovlev K, Olenina L, Kotov A, Barr J, Zhukova M, Schedl P, Shidlovskii Y. The 3’UTR of the Drosophila CPEB translation factor gene orb2 plays a crucial role in spermatogenesis. Development. 2021;148(17). PMCID: PMC8513165 Reference Link
1.Del Toro J, Fine A, Wang M-T, Thomas A, Schneper L, Mitchell C, Mincy R, McLanahan S, Notterman D. The Longitudinal Associations Between Paternal Incarceration and Family Well-Being: Implications for Ethnic/Racial Disparities in Health. J Am Acad Child Adolesc Psychiatry. 2022;61(3):423–433. PMCID: PMC8828798 Reference Link
1.Ing-Simmons E, Vaid R, Bing X, Levine M, Mannervik M, Vaquerizas J. Independence of chromatin conformation and gene regulation during Drosophila dorsoventral patterning. Nat Genet. 2021;53(4):487–499. PMCID: PMC8035076 Reference Link
1.Schild T, McReynolds M, Shea C, Low V, Schaffer B, Asara J, Piskounova E, Dephoure N, Rabinowitz J, Gomes A, Blenis J. NADK is activated by oncogenic signaling to sustain pancreatic ductal adenocarcinoma. Cell Rep. 2021;35(11):109238. PMID: 34133937 Reference Link
1.Ruf-Zamojski F, Zhang Z, Zamojski M, Smith G, Mendelev N, Liu H, Nudelman G, Moriwaki M, Pincas H, Castanon R, Nair V, Seenarine N, Amper M, Zhou X, Ongaro L, Toufaily C, Schang G, Nery J, Bartlett A, Aldridge A, Jain N, Childs G, Troyanskaya O, Ecker J, Turgeon J, Welt C, Bernard D, Sealfon S. Single nucleus multi-omics regulatory landscape of the murine pituitary. Nat Commun. 2021;12(1):2677. PMCID: PMC8113460 Reference Link
1.Yu D, Richardson N, Green C, Spicer A, Murphy M, Flores V, Jang C, Kasza I, Nikodemova M, Wakai M, Tomasiewicz J, Yang S, Miller B, Pak H, Brinkman J, Rojas J, Quinn W, Cheng E, Konon E, Haider L, Finke M, Sonsalla M, Alexander C, Rabinowitz J, Baur J, Malecki K, Lamming D. The adverse metabolic effects of branched-chain amino acids are mediated by isoleucine and valine. Cell Metab. 2021;33(5):905–922.e6. PMCID: PMC8102360 Reference Link
1.Cho S, Lee G, Pickering B, Jang C, Park J, He L, Mathur L, Kim S-S, Jung S, Tang H-W, Monette S, Rabinowitz J, Perrimon N, Jaffrey S, Blenis J. mTORC1 promotes cell growth via mA-dependent mRNA degradation. Mol Cell. 2021;81(10):2064–2075.e8. PMCID: PMC8356906 Reference Link
1.Chen F, Han Y, Kang Y. Bone marrow niches in the regulation of bone metastasis. Br J Cancer. 2021;124(12):1912–1920. PMCID: PMC8184962 Reference Link
1.Esposito M, Fang C, Cook K, Park N, Wei Y, Spadazzi C, Bracha D, Gunaratna R, Laevsky G, DeCoste C, Slabodkin H, Brangwynne C, Cristea I, Kang Y. TGF-β-induced DACT1 biomolecular condensates repress Wnt signalling to promote bone metastasis. Nat Cell Biol. 2021;23(3):257–267. PMCID: PMC7970447 Reference Link
1.Posfai E, Schell J, Janiszewski A, Rovic I, Murray A, Bradshaw B, Yamakawa T, Pardon T, Bakkali M, Talon I, De Geest N, Kumar P, To S, Petropoulos S, Jurisicova A, Pasque V, Lanner F, Rossant J. Evaluating totipotency using criteria of increasing stringency. Nat Cell Biol. 2021;23(1):49–60. PMCID: 2846056 Reference Link
1.Stahley S, Basta L, Sharan R, Devenport D. Celsr1 adhesive interactions mediate the asymmetric organization of planar polarity complexes. Elife. 2021;10. PMCID: PMC7857726 Reference Link
1.TeSlaa T, Bartman C, Jankowski C, Zhang Z, Xu X, Xing X, Wang L, Lu W, Hui S, Rabinowitz J. The Source of Glycolytic Intermediates in Mammalian Tissues. Cell Metab. 2021;33(2):367–378.e5. PMCID: PMC8088818 Reference Link
1.Bird L, Ochoa-Lubinoff C, Tan W-H, Heimer G, Melmed R, Rakhit A, Visootsak J, During M, Holcroft C, Burdine R, Kolevzon A, Thibert R. The STARS Phase 2 Study: A Randomized Controlled Trial of Gaboxadol in Angelman Syndrome. Neurology. 2021;96(7):e1024-e1035. PMCID: PMC8055330 Reference Link
1.Colonnetta M, Lym L, Wilkins L, Kappes G, Castro E, Ryder P, Schedl P, Lerit D, Deshpande G. Antagonism between and Torso receptor regulates transcriptional quiescence underlying germline/soma distinction. Elife. 2021;10. PMCID: PMC7843132 Reference Link
1.Mullola S, Brooks-Gunn J, Elovainio M, Hakulinen C, Schneper L, Notterman D. Early childhood psychosocial family risks and cumulative dopaminergic sensitizing score: Links to behavior problems in U.S. 9-year-olds. J Affect Disord. 2021;280(Pt A):432–441. PMCID: PMC7839973 Reference Link
1.Letizia A, Ramos I, Obla A, Goforth C, Weir D, Ge Y, Bamman M, Dutta J, Ellis E, Estrella L, George M-C, Gonzalez-Reiche A, Graham W, van de Guchte A, Gutierrez R, Jones F, Kalomoiri A, Lizewski R, Lizewski S, Marayag J, Marjanovic N, Millar E, Nair V, Nudelman G, Nunez E, Pike B, Porter C, Regeimbal J, Rirak S, Ana E, Sealfon R, Sebra R, Simons M, Soares-Schanoski A, Sugiharto V, Termini M, Vangeti S, Williams C, Troyanskaya O, van Bakel H, Sealfon S. SARS-CoV-2 Transmission among Marine Recruits during Quarantine. N Engl J Med. 2020;383(25):2407–2416. PMCID: PMC7675690 Reference Link
1.Klibaite U, Shaevitz J. Paired fruit flies synchronize behavior: Uncovering social interactions in Drosophila melanogaster. PLoS Comput Biol. 2020;16(10):e1008230. PMCID: PMC7567355 Reference Link
1.Zhang Y, Xu Y, Lu W, Ghergurovich J, Guo L, Blair I, Rabinowitz J, Yang X. Upregulation of Antioxidant Capacity and Nucleotide Precursor Availability Suffices for Oncogenic Transformation. Cell Metab. 2021;33(1):94–109.e8. PMCID: PMC7846267 Reference Link
1.Yau T, Kang Y-K, Kim T-Y, El-Khoueiry A, Santoro A, Sangro B, Melero I, Kudo M, Hou M-M, Matilla A, Tovoli F, Knox J, He A, El-Rayes B, Acosta-Rivera M, Lim H-Y, Neely J, Shen Y, Wisniewski T, Anderson J, Hsu C. Efficacy and Safety of Nivolumab Plus Ipilimumab in Patients With Advanced Hepatocellular Carcinoma Previously Treated With Sorafenib: The CheckMate 040 Randomized Clinical Trial. JAMA Oncol. 2020;6(11):e204564. PMCID: PMC7530824 Reference Link
1.Menon R, Otto E, Sealfon R, Nair V, Wong A, Theesfeld C, Chen X, Wang Y, Boppana A, Luo J, Yang Y, Kasson P, Schaub J, Berthier C, Eddy S, Lienczewski C, Godfrey B, Dagenais S, Sohaney R, Hartman J, Fermin D, Subramanian L, Looker H, Harder J, Mariani L, Hodgin J, Sexton J, Wobus C, Naik A, Nelson R, Troyanskaya O, Kretzler M. SARS-CoV-2 receptor networks in diabetic and COVID-19-associated kidney disease. Kidney Int. 2020;98(6):1502–1518. PMCID: PMC7543950 Reference Link
1.Murashige D, Jang C, Neinast M, Edwards J, Cowan A, Hyman M, Rabinowitz J, Frankel D, Arany Z. Comprehensive quantification of fuel use by the failing and nonfailing human heart. Science. 2020;370(6514):364–368. PMCID: PMC7871704 Reference Link
1.Fang C, Kang Y. Cellular plasticity in bone metastasis. Bone. 2022;158:115693. PMCID: PMC8046848 Reference Link
1.Kapheim K, Jones B, Pan H, Li C, Harpur B, Kent C, Zayed A, Ioannidis P, Waterhouse R, Kingwell C, Stolle E, Avalos A, Zhang G, McMillan O, Wcislo W. Developmental plasticity shapes social traits and selection in a facultatively eusocial bee. Proc Natl Acad Sci U S A. 2020;117(24):13615–13625. PMCID: PMC7306772 Reference Link
1.Ledo J, Zhang R, Mesin L, Mourão-Sá D, Azevedo E, Troyanskaya O, Bustos V, Greengard P. Lack of a site-specific phosphorylation of Presenilin 1 disrupts microglial gene networks and progenitors during development. PLoS One. 2020;15(8):e0237773. PMCID: PMC7444478 Reference Link
1.Stern T, Shvartsman S, Wieschaus E. Template-based mapping of dynamic motifs in tissue morphogenesis. PLoS Comput Biol. 2020;16(8):e1008049. PMCID: PMC7442231 Reference Link
1.Chen H, Gregor T. Using RNA Tags for Multicolor Live Imaging of Chromatin Loci and Transcription in Drosophila Embryos. Methods Mol Biol. 2020;2166:373–384. PMCID: PMC8130451 Reference Link
1.Johnson H, Djabrayan N, Shvartsman S, Toettcher J. Optogenetic Rescue of a Patterning Mutant. Curr Biol. 2020;30(17):3414–3424.e3. PMCID: PMC7730203 Reference Link