King S, Singh M. Primate protein-ligand interfaces exhibit significant conservation and unveil human-specific evolutionary drivers. PLoS Comput Biol. 2023;19(3):e1010966. PMCID: PMC10035887

Chen Z, Kang Y. Cold snap for cancer: cold-induced brown fat thermogenesis starves tumor growth. Signal Transduct Target Ther. 2023;8(1):10. PMCID: PMC9826784

Cashen K, Sutton R, Reeder R, Ahmed T, Bell M, Berg R, Burns C, Carcillo J, Carpenter T, Dean M, Diddle W, Federman M, Fink E, Franzon D, Frazier A, Friess S, Graham K, Hall M, Hehir D, Horvat C, Huard L, KirkpatrickN T, Maa T, Manga A, McQuillen P, Morgan R, Mourani P, Nadkarni V, Naim M, Notterman D, Page K, Pollack M, Qunibi D, Sapru A, Schneiter C, Sharron M, Srivastava N, Viteri S, Wessel D, Wolfe H, Yates A, Zuppa A, Meert K, Eunice Kennedy Shriver National Institute of Child Health and Human Development Collaborative Pediatric Critical Care Research Network (CPCCRN) and National Heart Lung and Blood Institute ICU-RESUScitation Project Investigators. Calcium use during paediatric in-hospital cardiac arrest is associated with worse outcomes. Resuscitation. 2023;185:109673. PMCID: PMC10065910

Berg R, Morgan R, Reeder R, Ahmed T, Bell M, Bishop R, Bochkoris M, Burns C, Carcillo J, Carpenter T, Dean M, Diddle W, Federman M, Fernandez R, Fink E, Franzon D, Frazier A, Friess S, Graham K, Hall M, Hehir D, Horvat C, Huard L, Maa T, Manga A, McQuillen P, Meert K, Mourani P, Nadkarni V, Naim M, Notterman D, Palmer C, Pollack M, Sapru A, Schneiter C, Sharron M, Srivastava N, Tabbutt S, Tilford B, Viteri S, Wessel D, Wolfe H, Yates A, Zuppa A, Sutton R. Diastolic Blood Pressure Threshold During Pediatric Cardiopulmonary Resuscitation and Survival Outcomes: A Multicenter Validation Study. Crit Care Med. 2023;51(1):91–102. PMCID: PMC9970166

Cappuccio A, Chawla D, Chen X, Rubenstein A, Cheng W, Mao W, Burke T, Tsalik E, Petzold E, Henao R, McClain M, Woods C, Chikina M, Troyanskaya O, Sealfon S, Kleinstein S, Zaslavsky E. Multi-objective optimization identifies a specific and interpretable COVID-19 host response signature. Cell Syst. 2022;13(12):989–1001.e8. PMID: 36549275

Meyer C, Seath C, Knutson S, Lu W, Rabinowitz J, MacMillan D. Photoproximity Labeling of Sialylated Glycoproteins (GlycoMap) Reveals Sialylation-Dependent Regulation of Ion Transport. J Am Chem Soc. 2022;144(51):23633–23641. PMID: 36525649

Arich S, Haba Y, Assaid N, Fritz M, McBride C, Weill M, Taki H, Sarih M, Labbé P. No association between habitat, autogeny and genetics in Moroccan Culex pipiens populations. Parasit Vectors. 2022;15(1):405. PMCID: PMC9635193

Rose N, Dabo S, Leal S, Sylla M, Diagne C, Faye O, Faye O, Sall A, McBride C, Lambrechts L. Enhanced mosquito vectorial capacity underlies the Cape Verde Zika epidemic. PLoS Biol. 2022;20(10):e3001864. PMCID: PMC9604947

Sauerwald N, Zhang Z, Ramos I, Nair V, Soares-Schanoski A, Ge Y, Mao W, Alshammary H, Gonzalez-Reiche A, van de Guchte A, Goforth C, Lizewski R, Lizewski S, Amper M, Vasoya M, Seenarine N, Guevara K, Marjanovic N, Miller C, Nudelman G, Schilling M, Sealfon R, Termini M, Vangeti S, Weir D, Zaslavsky E, Chikina M, Wu Y, van Bakel H, Letizia A, Sealfon S, Troyanskaya O. Pre-infection antiviral innate immunity contributes to sex differences in SARS-CoV-2 infection. Cell Syst. 2022;13(11):924–931.e4. PMCID: PMC9623453

Omenn G, Lane L, Overall C, Pineau C, Packer N, Cristea I, Lindskog C, Weintraub S, Orchard S, Roehrl M, Nice E, Liu S, Bandeira N, Chen Y-J, Guo T, Aebersold R, Moritz R, Deutsch E. The 2022 Report on the Human Proteome from the HUPO Human Proteome Project. J Proteome Res. 2023;22(4):1024–1042. PMCID: PMC10081950

Murashige D, Jung J, Neinast M, Levin M, Chu Q, Lambert J, Garbincius J, Kim B, Hoshino A, Marti-Pamies I, McDaid K, Shewale S, Flam E, Yang S, Roberts E, Li L, Morley M, Bedi K, Hyman M, Frankel D, Margulies K, Assoian R, Elrod J, Jang C, Rabinowitz J, Arany Z. Extra-cardiac BCAA catabolism lowers blood pressure and protects from heart failure. Cell Metab. 2022;34(11):1749–1764.e7. PMCID: PMC9633425

Horvat C, Fabio A, Nagin D, Banks R, Qin Y, Park H-J, Kernan K, Canna S, Berg R, Wessel D, Pollack M, Meert K, Hall M, Newth C, Lin J, Doctor A, Shanley T, Cornell T, Harrison R, Zuppa A, Reeder R, Sward K, Holubkov R, Notterman D, Dean M, Carcillo J, Eunice Kennedy Shriver National Institute of Child Health and Human Development Collaborative Pediatric Critical Care Research Network. Mortality Risk in Pediatric Sepsis Based on C-reactive Protein and Ferritin Levels. Pediatr Crit Care Med. 2022;23(12):968–979. PMCID: PMC9722561

Cota V, Sohrabi S, Kaletsky R, Murphy C. Oocyte mitophagy is critical for extended reproductive longevity. PLoS Genet. 2022;18(9):e1010400. PMCID: PMC9524673

Shen M, Kang Y. Cancer fitness genes: emerging therapeutic targets for metastasis. Trends Cancer. 2023;9(1):69–82. PMID: 36184492

Cheng K, Burdine R, Dickinson M, Ekker S, Lin A, Lloyd K, Lutz C, MacRae C, Morrison J, O’Connor D, Postlethwait J, Rogers C, Sanchez S, Simpson J, Talbot W, Wallace D, Weimer J, Bellen H. Promoting validation and cross-phylogenetic integration in model organism research. Dis Model Mech. 2022;15(9). PMCID: PMC9531892

Amin J, Zhao T, Yang H, Shaevitz J. Multicolor multifocal 3D microscopy using in-situ optimization of a spatial light modulator. Sci Rep. 2022;12(1):16343. PMCID: PMC9522655

Caragiulo A, Gaughran S, Duncan N, Nagy C, Weckel M, vonHoldt B. Coyotes in New York City Carry Variable Genomic Dog Ancestry and Influence Their Interactions with Humans. Genes (Basel). 2022;13(9). PMCID: PMC9498729

Nguyen T, Costa E, Deibert T, Reyes J, Keber F, Tomschik M, Stadlmeier M, Gupta M, Kumar C, Cruz E, Amodeo A, Gatlin J, Wühr M. Differential nuclear import sets the timing of protein access to the embryonic genome. Nat Commun. 2022;13(1):5887. PMCID: PMC9537182

French H, Pitre E, Oade M, Elshina E, Bisht K, King A, Bauer D, Velthuis A. Transient RNA structures cause aberrant influenza virus replication and innate immune activation. Sci Adv. 2022;8(36):eabp8655. PMCID: PMC9462681

Jiang X, Yan N, Deng D, Yan C. Structural aspects of the glucose and monocarboxylate transporters involved in the Warburg effect. IUBMB Life. 2022;74(12):1180–1199. PMID: 36082803

Taylor I, Murray-Nerger L, Greco T, Liu D, Cristea I, Bassler B. Protein Interaction Networks of Catalytically Active and Catalytically Inactive PqsE in Pseudomonas aeruginosa. mBio. 2022;13(5):e0155922. PMCID: PMC9600345

Morgan R, Wolfe H, Reeder R, Alvey J, Frazier A, Friess S, Maa T, McQuillen P, Meert K, Nadkarni V, Sharron M, Siems A, Yates A, Ahmed T, Bell M, Bishop R, Bochkoris M, Burns C, Carcillo J, Carpenter T, Dean M, Diddle W, Federman M, Fernandez R, Fink E, Franzon D, Hall M, Hehir D, Horvat C, Huard L, Manga A, Mourani P, Naim M, Notterman D, Pollack M, Sapru A, Schneiter C, Srivastava N, Tabbutt S, Tilford B, Viteri S, Wessel D, Zuppa A, Berg R, Sutton R. The Temporal Association of the COVID-19 Pandemic and Pediatric Cardiopulmonary Resuscitation Quality and Outcomes. Pediatr Crit Care Med. 2022;23(11):908–918. PMCID: PMC9624237

Suzuki S, Geri J, Knutson S, Bell-Temin H, Tamura T, Fernández D, Lovett G, Till N, Heller B, Guo J, MacMillan D, Ploss A. Photochemical Identification of Auxiliary Severe Acute Respiratory Syndrome Coronavirus 2 Host Entry Factors Using μMap. J Am Chem Soc. 2022;144(36):16604–16611. PMCID: PMC9469761

Chen H, Zhan M, Liu J, Liu Z, Shen M, Yang F, Kang Y, Yin F, Li Z. Structure-Based Design, Optimization, and Evaluation of Potent Stabilized Peptide Inhibitors Disrupting MTDH and SND1 Interaction. J Med Chem. 2022;65(18):12188–12199. PMID: 36044768

Mitchener M, Muir T. Oncohistones: Exposing the nuances and vulnerabilities of epigenetic regulation. Mol Cell. 2022;82(16):2925–2938. PMCID: PMC9482148

Cashen K, Reeder R, Ahmed T, Bell M, Berg R, Burns C, Carcillo J, Carpenter T, Dean M, Diddle W, Federman M, Fink E, Frazier A, Friess S, Graham K, Hall M, Hehir D, Horvat C, Huard L, Maa T, Manga A, McQuillen P, Morgan R, Mourani P, Nadkarni V, Naim M, Notterman D, Palmer C, Pollack M, Schneiter C, Sharron M, Srivastava N, Wessel D, Wolfe H, Yates A, Zuppa A, Sutton R, Meert K, for the Eunice Kennedy Shriver National Institute of Child Health and Human Development Collaborative Pediatric Critical Care Research Network (CPCCRN) and. Sodium Bicarbonate Use During Pediatric Cardiopulmonary Resuscitation: A Secondary Analysis of the ICU-RESUScitation Project Trial. Pediatr Crit Care Med. 2022;23(10):784–792. PMCID: PMC9529841

Ruiz N, Silhavy T. How Escherichia coli Became the Flagship Bacterium of Molecular Biology. J Bacteriol. 2022;204(9):e0023022. PMCID: PMC9487582

Jankowski C, Rabinowitz J. Selenium Modulates Cancer Cell Response to Pharmacologic Ascorbate. Cancer Res. 2022;82(19):3486–3498. PMCID: PMC9532358

Lizewski R, Sealfon R, Park S, Smith G, Porter C, Gonzalez-Reiche A, Ge Y, Miller C, Goforth C, Pincas H, Termini M, Ramos I, Nair V, Lizewski S, Alshammary H, Cer R, Chen H, George M-C, Arnold C, Glang L, Long K, Malagon F, Marayag J, Nunez E, Rice G, Ana E, Schilling M, Smith D, Sugiharto V, Sun P, van de Guchte A, Khan Z, Dutta J, Vangeti S, Voegtly L, Weir D, Metcalf J, Troyanskaya O, Bishop-Lilly K, Grenfell B, van Bakel H, Letizia A, Sealfon S. SARS-CoV-2 Outbreak Dynamics in an Isolated US Military Recruit Training Center With Rigorous Prevention Measures. Epidemiology. 2022;33(6):797–807. PMCID: PMC9531985

Bushin L, Covington B, Clark K, Caruso A, Seyedsayamdost M. Bicyclostreptins are radical SAM enzyme-modified peptides with unique cyclization motifs. Nat Chem Biol. 2022;18(10):1135–1143. PMCID: 6686864

Covington B, Seyedsayamdost M. Vitamin B3 Triggers Biosynthesis of Secondary Metabolite Dormancy Signals in . J Am Chem Soc. 2022;144(33):14997–15001. PMID: 35969232

Taylor I, Jeffrey P, Moustafa D, Goldberg J, Bassler B. The PqsE Active Site as a Target for Small Molecule Antimicrobial Agents against . Biochemistry. 2022;61(17):1894–1903. PMCID: PMC9454246

Cook K, Tsopurashvili E, Needham J, Thompson S, Cristea I. Restructured membrane contacts rewire organelles for human cytomegalovirus infection. Nat Commun. 2022;13(1):4720. PMCID: PMC9366835

Blostein F, Fisher J, Dou J, Schneper L, Ware E, Notterman D, Mitchell C, Bakulski K. Polymethylation scores for prenatal maternal smoke exposure persist until age 15 and are detected in saliva in the Fragile Families and Child Wellbeing cohort. Epigenetics. 2022;17(13):2223–2240. PMCID: PMC9665138

Bisht K, Velthuis A. Decoding the Role of Temperature in RNA Virus Infections. mBio. 2022;13(5):e0202122. PMCID: PMC9600459

Zhang Y, Xu Y, Lu W, Li J, Yu S, Brown E, Stanger B, Rabinowitz J, Yang X. G6PD-mediated increase in de novo NADP biosynthesis promotes antioxidant defense and tumor metastasis. Sci Adv. 2022;8(29):eabo0404. PMCID: PMC9299539

Arguello E, Li A, Sun X, Eggert T, Mairhofer E, Kleiner R. Reactivity-dependent profiling of RNA 5-methylcytidine dioxygenases. Nat Commun. 2022;13(1):4176. PMCID: PMC9296451

Lim A, Menegatti S, Bustamante J, Le Bourhis L, Allez M, Rogge L, Casanova J-L, Yssel H, Di Santo J. IL-12 drives functional plasticity of human group 2 innate lymphoid cells. J Exp Med. 2016;213(4):569–83. PMCID: PMC4821648

Lim A, Verrier T, Vosshenrich C, Di Santo J. Developmental options and functional plasticity of innate lymphoid cells. Curr Opin Immunol. 2017;44:61–68. PMID: 28359987

Lim A, Li Y, Lopez-Lastra S, Stadhouders R, Paul F, Casrouge A, Serafini N, Puel A, Bustamante J, Surace L, Masse-Ranson G, David E, Strick-Marchand H, Le Bourhis L, Cocchi R, Topazio D, Graziano P, Muscarella L, Rogge L, Norel X, Sallenave J-M, Allez M, Graf T, Hendriks R, Casanova J-L, Amit I, Yssel H, Di Santo J. Systemic Human ILC Precursors Provide a Substrate for Tissue ILC Differentiation. Cell. 2017;168(6):1086–1100.e10. PMID: 28283063

Lim A, Harrison O, Belkaid Y. Pre-birth memory. Nat Immunol. 2019;20(3):254–256. PMID: 30742077

Scheffler R, Bratton B, Gitai Z. Pseudomonas aeruginosa clinical blood isolates display significant phenotypic variability. PLoS One. 2022;17(7):e0270576. PMCID: PMC9258867

Kumar H, Jimah J, Misal S, Salinas N, Fried M, Schlesinger P, Tolia N. Implications of conformational flexibility, lipid binding, and regulatory domains in cell-traversal protein CelTOS for apicomplexan migration. J Biol Chem. 2022;298(9):102241. PMCID: PMC9400078

Do T, Thokkadam A, Leach R, Link J. Phenotype-Guided Comparative Genomics Identifies the Complete Transport Pathway of the Antimicrobial Lasso Peptide Ubonodin in . ACS Chem Biol. 2022;17(8):2332–2343. PMCID: PMC9454059

Chen K, Wong A, Troyanskaya O, Zhou J. A sequence-based global map of regulatory activity for deciphering human genetics. Nat Genet. 2022;54(7):940–949. PMCID: PMC9279145

Travis S, Mahon B, Petry S. How Microtubules Build the Spindle Branch by Branch. Annu Rev Cell Dev Biol. 2022;38:1–23. PMCID: PMC9619725

Lindell R, Zhang D, Bush J, Wallace D, Rabinowitz J, Lu W, Wherry J, Weiss S, Henrickson S. Impaired Lymphocyte Responses in Pediatric Sepsis Vary by Pathogen Type and are Associated with Features of Immunometabolic Dysregulation. Shock. 2022;57(6):191–199. PMCID: PMC9245144

Du J, Estrella M, Solorio-Kirpichyan K, Jeffrey P, Korennykh A. Structure of human NADK2 reveals atypical assembly and regulation of NAD kinases from animal mitochondria. Proc Natl Acad Sci U S A. 2022;119(26):e2200923119. PMCID: PMC9245612

Hansen J, Sealfon R, Menon R, Eadon M, Lake B, Steck B, Anjani K, Parikh S, Sigdel T, Zhang G, Velickovic D, Barwinska D, Alexandrov T, Dobi D, Rashmi P, Otto E, Rivera M, Rose M, Anderton C, Shapiro J, Pamreddy A, Winfree S, Xiong Y, He Y, de Boer I, Hodgin J, Barisoni L, Naik A, Sharma K, Sarwal M, Zhang K, Himmelfarb J, Rovin B, El-Achkar T, Laszik Z, He J, Dagher P, Valerius T, Jain S, Satlin L, Troyanskaya O, Kretzler M, Iyengar R, Azeloglu E, Kidney Precision Medicine Project. A reference tissue atlas for the human kidney. Sci Adv. 2022;8(23):eabn4965. PMCID: PMC9176741

Biswas S, Rust L, Wettengel J, Yusova S, Fischer M, Carson J, Johnson J, Wei L, Thode T, Kaadige M, Sharma S, Agbaria M, Bimber B, Tu T, Protzer U, Ploss A, Smedley J, Golomb G, Sacha J, Burwitz B. Long-term hepatitis B virus infection of rhesus macaques requires suppression of host immunity. Nat Commun. 2022;13(1):2995. PMCID: PMC9151762