1.Arita Y, Kim G, Li Z, Friesen H, Turco G, Wang R, Climie D, Usaj M, Hotz M, Stoops E, Baryshnikova A, Boone C, Botstein D, Andrews B, McIsaac S. A genome-scale yeast library with inducible expression of individual genes. Mol Syst Biol. 2021;17(6):e10207. PMCID: PMC8182650 Reference Link
1.Bagert J, Mitchener M, Patriotis A, Dul B, Wojcik F, Nacev B, Feng L, Allis D, Muir T. Oncohistone mutations enhance chromatin remodeling and alter cell fates. Nat Chem Biol. 2021;17(4):403–411. PMCID: PMC8174649 Reference Link
1.Li W, Shen M, Jiang Y-Z, Zhang R, Zheng H, Wei Y, Shao Z-M, Kang Y. Deubiquitinase USP20 promotes breast cancer metastasis by stabilizing SNAI2. Genes Dev. 2020;34(19-20):1310–1315. PMCID: PMC7528704 Reference Link
1.Arguello E, Leach R, Kleiner R. Selection with a Site-Specifically Modified RNA Library Reveals the Binding Preferences of N-Methyladenosine Reader Proteins. Biochemistry. 2019;58(31):3386–3395. PMCID: PMC6684389 Reference Link
1.Chen K, Cofer E, Zhou J, Troyanskaya O. Selene: a PyTorch-based deep learning library for sequence data. Nat Methods. 2019;16(4):315–318. PMCID: PMC7148117 Reference Link
1.Li X, Patena W, Fauser F, Jinkerson R, Saroussi S, Meyer M, Ivanova N, Robertson J, Yue R, Zhang R, Vilarrasa-Blasi J, Wittkopp T, Ramundo S, Blum S, Goh A, Laudon M, Srikumar T, Lefebvre P, Grossman A, Jonikas M. A genome-wide algal mutant library and functional screen identifies genes required for eukaryotic photosynthesis. Nat Genet. 2019;51(4):627–635. PMCID: PMC6636631 Reference Link
1.Sigoillot F, Lyman S, Huckins J, Adamson B, Chung E, Quattrochi B, King R. A bioinformatics method identifies prominent off-targeted transcripts in RNAi screens. Nat Methods. 2012;9(4):363–6. PMCID: PMC3482495 Reference Link
1.Kaletsky R, Yao V, Williams A, Runnels A, Tadych A, Zhou S, Troyanskaya O, Murphy C. Transcriptome analysis of adult Caenorhabditis elegans cells reveals tissue-specific gene and isoform expression. PLoS Genet. 2018;14(8):e1007559. PMCID: PMC6105014 Reference Link
1.Bradley L, Kleiner R, Wang A, Hecht M, Wood D. An intein-based genetic selection allows the construction of a high-quality library of binary patterned de novo protein sequences. Protein Eng Des Sel. 2005;18(4):201–7. PMID: 15849217 Reference Link
1.Hecht M, Zarzhitsky S, Karas C, Chari S. Are natural proteins special? Can we do that?. Curr Opin Struct Biol. 2018;48:124–132. PMID: 29306103 Reference Link
1.Baym M, Shaket L, Anzai I, Adesina O, Barstow B. Rapid construction of a whole-genome transposon insertion collection for Shewanella oneidensis by Knockout Sudoku. Nat Commun. 2016;7:13270. PMCID: PMC5109470 Reference Link
1.Ducker G, Chen L, Morscher R, Ghergurovich J, Esposito M, Teng X, Kang Y, Rabinowitz J. Reversal of Cytosolic One-Carbon Flux Compensates for Loss of the Mitochondrial Folate Pathway. Cell Metab. 2016;23(6):1140–1153. PMCID: PMC4909566 Reference Link
1.Li X, Zhang R, Patena W, Gang S, Blum S, Ivanova N, Yue R, Robertson J, Lefebvre P, Fitz-Gibbon S, Grossman A, Jonikas M. An Indexed, Mapped Mutant Library Enables Reverse Genetics Studies of Biological Processes in Chlamydomonas reinhardtii. Plant Cell. 2016;28(2):367–87. PMCID: PMC4790863 Reference Link
1.Hoegler K, Hecht M. A de novo protein confers copper resistance in Escherichia coli. Protein Sci. 2016;25(7):1249–59. PMCID: PMC4918413 Reference Link
1.Hammer B, Bassler B. Distinct sensory pathways in Vibrio cholerae El Tor and classical biotypes modulate cyclic dimeric GMP levels to control biofilm formation. J Bacteriol. 2009;191(1):169–77. PMCID: PMC2612459 Reference Link
