Petkova M, Tkačik G, Bialek W, Wieschaus E, Gregor T. Optimal Decoding of Cellular Identities in a Genetic Network. Cell. 2019;176(4):844–855.e15. PMCID: PMC6526179

Wittes J, Schüpbach T. A Gene Expression Screen in Identifies Novel JAK/STAT and EGFR Targets During Oogenesis. G3 (Bethesda). 2019;9(1):47–60. PMCID: PMC6325903

Eagle W, Yeboah-Kordieh D, Niepielko M, Gavis E. Distinct -acting elements mediate targeting and clustering of polar granule mRNAs. Development. 2018;145(22). PMCID: PMC6262787

Kachaev Z, Lebedeva L, Kozlov E, Toropygin I, Schedl P, Shidlovskii Y. Paip2 is localized to active promoters and loaded onto nascent mRNA in Drosophila. Cell Cycle. 2018;17(14):1708–1720. PMCID: PMC6133343

Kyrchanova O, Kurbidaeva A, Sabirov M, Postika N, Wolle D, Aoki T, Maksimenko O, Mogila V, Schedl P, Georgiev P. The bithorax complex iab-7 Polycomb response element has a novel role in the functioning of the Fab-7 chromatin boundary. PLoS Genet. 2018;14(8):e1007442. PMCID: PMC6110506

Cande J, Namiki S, Qiu J, Korff W, Card G, Shaevitz J, Stern D, Berman G. Optogenetic dissection of descending behavioral control in . Elife. 2018;7. PMCID: PMC6031430

Goyal Y, Schüpbach T, Shvartsman S. A quantitative model of developmental RTK signaling. Dev Biol. 2018;442(1):80–86. PMCID: PMC6501586

Fedotova A, Aoki T, Rossier M, Mishra R, Clendinen C, Kyrchanova O, Wolle D, Bonchuk A, Maeda R, Mutero A, Cleard F, Mogila V, Karch F, Georgiev P, Schedl P. The BEN Domain Protein Insensitive Binds to the Chromatin Boundary To Establish Proper Segmental Identity in . Genetics. 2018;210(2):573–585. PMCID: PMC6216583

Niepielko M, Eagle W, Gavis E. Stochastic Seeding Coupled with mRNA Self-Recruitment Generates Heterogeneous Drosophila Germ Granules. Curr Biol. 2018;28(12):1872–1881.e3. PMCID: PMC6008217

Aguilera-Gomez A, Zacharogianni M, van Oorschot M, Genau H, Grond R, Veenendaal T, Sinsimer K, Gavis E, Behrends C, Rabouille C. Phospho-Rasputin Stabilization by Sec16 Is Required for Stress Granule Formation upon Amino Acid Starvation. Cell Rep. 2017;20(4):935–948. PMCID: PMC6064189

Cardoso M, Fontenele M, Lim B, Bisch P, Shvartsman S, Araujo H. A novel function for the IκB inhibitor Cactus in promoting Dorsal nuclear localization and activity in the embryo. Development. 2017;144(16):2907–2913. PMCID: PMC5592809

Hannon C, Blythe S, Wieschaus E. Concentration dependent chromatin states induced by the bicoid morphogen gradient. Elife. 2017;6. PMCID: PMC5624782

Stern D, Clemens J, Coen P, Calhoun A, Hogenesch J, Arthur B, Murthy M. Experimental and statistical reevaluation provides no evidence for courtship song rhythms. Proc Natl Acad Sci U S A. 2017;114(37):9978–9983. PMCID: PMC5604024

Pereira T, Murthy M. To Fight or Not to Fight. Neuron. 2017;95(5):986–988. PMID: 28858625

Kaye E, Kurbidaeva A, Wolle D, Aoki T, Schedl P, Larschan E. Drosophila Dosage Compensation Loci Associate with a Boundary-Forming Insulator Complex. Mol Cell Biol. 2017;37(21). PMCID: PMC5640815

Goyal Y, Levario T, Mattingly H, Holmes S, Shvartsman S, Lu H. Parallel imaging of embryos for quantitative analysis of genetic perturbations of the Ras pathway. Dis Model Mech. 2017;10(7):923–929. PMCID: PMC5536913

Kyrchanova O, Zolotarev N, Mogila V, Maksimenko O, Schedl P, Georgiev P. Architectural protein Pita cooperates with dCTCF in organization of functional boundaries in Bithorax complex. Development. 2017;144(14):2663–2672. PMCID: PMC5536930

Tamayo J, Teramoto T, Chatterjee S, Hall T, Gavis E. The Drosophila hnRNP F/H Homolog Glorund Uses Two Distinct RNA-Binding Modes to Diversify Target Recognition. Cell Rep. 2017;19(1):150–161. PMCID: PMC5392723

Pritykin Y, Brito T, Schüpbach T, Singh M, Pane A. Integrative analysis unveils new functions for the Cutoff protein in noncoding RNA biogenesis and gene regulation. RNA. 2017;23(7):1097–1109. PMCID: PMC5473144

Rogers W, Goyal Y, Yamaya K, Shvartsman S, Levine M. Uncoupling neurogenic gene networks in the embryo. Genes Dev. 2017;31(7):634–638. PMCID: PMC5411704

Lomaev D, Mikhailova A, Erokhin M, Shaposhnikov A, Moresco J, Blokhina T, Wolle D, Aoki T, Ryabykh V, Yates J, Shidlovskii Y, Georgiev P, Schedl P, Chetverina D. The GAGA factor regulatory network: Identification of GAGA factor associated proteins. PLoS One. 2017;12(3):e0173602. PMCID: PMC5351981

Deshpande G, Barr J, Gerlitz O, Lebedeva L, Shidlovskii Y ii, Schedl P. Cells on the move: Modulation of guidance cues during germ cell migration. Fly (Austin). 2017;11(3):200–207. PMCID: PMC5552272

Devergne O, Sun G, Schüpbach T. Stratum, a Homolog of the Human GEF Mss4, Partnered with Rab8, Controls the Basal Restriction of Basement Membrane Proteins in Epithelial Cells. Cell Rep. 2017;18(8):1831–1839. PMCID: PMC5693311

Wang Q, Taliaferro M, Klibaite U, Hilgers V, Shaevitz J, Rio D. The PSI-U1 snRNP interaction regulates male mating behavior in Drosophila. Proc Natl Acad Sci U S A. 2016;113(19):5269–74. PMCID: PMC4868454

Anllo L, Schüpbach T. Signaling through the G-protein-coupled receptor Rickets is important for polarity, detachment, and migration of the border cells in Drosophila. Dev Biol. 2016;414(2):193–206. PMCID: PMC4887387

Bonchuk A, Maksimenko O, Kyrchanova O, Ivlieva T, Mogila V, Deshpande G, Wolle D, Schedl P, Georgiev P. Functional role of dimerization and CP190 interacting domains of CTCF protein in Drosophila melanogaster. BMC Biol. 2015;13:63. PMCID: PMC4528719

Deshpande G, Manry D, Jourjine N, Mogila V, Mozes H, Bialistoky T, Gerlitz O, Schedl P. Role of the ABC transporter Mdr49 in Hedgehog signaling and germ cell migration. Development. 2016;143(12):2111–20. PMCID: PMC4920174

Kyrchanova O, Mogila V, Wolle D, Deshpande G, Parshikov A, Cleard F, Karch F, Schedl P, Georgiev P. Functional Dissection of the Blocking and Bypass Activities of the Fab-8 Boundary in the Drosophila Bithorax Complex. PLoS Genet. 2016;12(7):e1006188. PMCID: PMC4948906

Weng M, Wieschaus E. Polarity protein Par3/Bazooka follows myosin-dependent junction repositioning. Dev Biol. 2017;422(2):125–134. PMCID: PMC5515594

Falahati H, Wieschaus E. Independent active and thermodynamic processes govern the nucleolus assembly in vivo. Proc Natl Acad Sci U S A. 2017;114(6):1335–1340. PMCID: PMC5307486

Lerit D, Shebelut C, Lawlor K, Rusan N, Gavis E, Schedl P, Deshpande G. Germ Cell-less Promotes Centrosome Segregation to Induce Germ Cell Formation. Cell Rep. 2017;18(4):831–839. PMCID: PMC5327791

Trovisco V, Belaya K, Nashchekin D, Irion U, Sirinakis G, Butler R, Lee J, Gavis E, St Johnston D. mRNA localises to the oocyte anterior by random Dynein-mediated transport and anchoring. Elife. 2016;5. PMCID: PMC5125753

Tenenbaum C, Gavis E. Removal of Drosophila Muscle Tissue from Larval Fillets for Immunofluorescence Analysis of Sensory Neurons and Epidermal Cells. J Vis Exp. 2016;(117). PMCID: PMC5226124

Jindal G, Goyal Y, Yamaya K, Futran A, Kountouridis I, Balgobin C, Schüpbach T, Burdine R, Shvartsman S. In vivo severity ranking of Ras pathway mutations associated with developmental disorders. Proc Natl Acad Sci U S A. 2017;114(3):510–515. PMCID: PMC5255624

Cleard F, Wolle D, Taverner A, Aoki T, Deshpande G, Andolfatto P, Karch F, Schedl P. Different Evolutionary Strategies To Conserve Chromatin Boundary Function in the Bithorax Complex. Genetics. 2017;205(2):589–603. PMCID: PMC5289839

Blythe S, Wieschaus E. Establishment and maintenance of heritable chromatin structure during early embryogenesis. Elife. 2016;5. PMCID: PMC5156528

He B, Martin A, Wieschaus E. Flow-dependent myosin recruitment during Drosophila cellularization requires zygotic dunk activity. Development. 2016;143(13):2417–30. PMCID: PMC4958320

Wieschaus E. Positional Information and Cell Fate Determination in the Early Drosophila Embryo. Curr Top Dev Biol. 2016;117:567–79. PMID: 26970001

Bhogal B, Plaza-Jennings A, Gavis E. Nanos-mediated repression of hid protects larval sensory neurons after a global switch in sensitivity to apoptotic signals. Development. 2016;143(12):2147–59. PMCID: PMC4920170

Yang L, Paul S, Trieu K, Dent L, Froldi F, Forés M, Webster K, Siegfried K, Kondo S, Harvey K, Cheng L, Jiménez G, Shvartsman S, Veraksa A. Minibrain and Wings apart control organ growth and tissue patterning through down-regulation of Capicua. Proc Natl Acad Sci U S A. 2016;113(38):10583–8. PMCID: PMC5035877

Kyrchanova O, Mogila V, Wolle D, Magbanua J, White R, Georgiev P, Schedl P. The boundary paradox in the Bithorax complex. Mech Dev. 2015;138 Pt 2(Pt 2):122–132. PMCID: PMC4890074

Di Talia S, She R, Blythe S, Lu X, Zhang Q, Wieschaus E. Posttranslational control of Cdc25 degradation terminates Drosophila’s early cell-cycle program. Curr Biol. 2013;23(2):127–32. PMCID: PMC3622868

Momen-Roknabadi A, Di Talia S, Wieschaus E. Transcriptional Timers Regulating Mitosis in Early Drosophila Embryos. Cell Rep. 2016;16(11):2793–2801. PMCID: PMC5386176

Pritykin Y, Ghersi D, Singh M. Genome-Wide Detection and Analysis of Multifunctional Genes. PLoS Comput Biol. 2015;11(10):e1004467. PMCID: PMC4593560

Futran A, Kyin S, Shvartsman S, Link J. Mapping the binding interface of ERK and transcriptional repressor Capicua using photocrosslinking. Proc Natl Acad Sci U S A. 2015;112(28):8590–5. PMCID: PMC4507193

Bothma J, Garcia H, Ng S, Perry M, Gregor T, Levine M. Enhancer additivity and non-additivity are determined by enhancer strength in the Drosophila embryo. Elife. 2015;4. PMCID: PMC4532966

Tanentzapf G, Devenport D, Godt D, Brown N. Integrin-dependent anchoring of a stem-cell niche. Nat Cell Biol. 2007;9(12):1413–8. PMCID: PMC3529653

Sinsimer K, Lee J, Thiberge S, Gavis E. Germ plasm anchoring is a dynamic state that requires persistent trafficking. Cell Rep. 2013;5(5):1169–77. PMCID: PMC4149184

Little S, Sinsimer K, Lee J, Wieschaus E, Gavis E. Independent and coordinate trafficking of single Drosophila germ plasm mRNAs. Nat Cell Biol. 2015;17(5):558–68. PMCID: PMC4417036

López-Panadès E, Gavis E, Casacuberta E. Specific Localization of the Drosophila Telomere Transposon Proteins and RNAs, Give Insight in Their Behavior, Control and Telomere Biology in This Organism. PLoS One. 2015;10(6):e0128573. PMCID: PMC4467039