1.Cappuccio A, Chawla D, Chen X, Rubenstein A, Cheng W, Mao W, Burke T, Tsalik E, Petzold E, Henao R, McClain M, Woods C, Chikina M, Troyanskaya O, Sealfon S, Kleinstein S, Zaslavsky E. Multi-objective optimization identifies a specific and interpretable COVID-19 host response signature. Cell Syst. 2022;13(12):989–1001.e8. PMID: 36549275 Reference Link
1.Sauerwald N, Zhang Z, Ramos I, Nair V, Soares-Schanoski A, Ge Y, Mao W, Alshammary H, Gonzalez-Reiche A, van de Guchte A, Goforth C, Lizewski R, Lizewski S, Amper M, Vasoya M, Seenarine N, Guevara K, Marjanovic N, Miller C, Nudelman G, Schilling M, Sealfon R, Termini M, Vangeti S, Weir D, Zaslavsky E, Chikina M, Wu Y, van Bakel H, Letizia A, Sealfon S, Troyanskaya O. Pre-infection antiviral innate immunity contributes to sex differences in SARS-CoV-2 infection. Cell Syst. 2022;13(11):924–931.e4. PMCID: PMC9623453 Reference Link
1.Horvat C, Fabio A, Nagin D, Banks R, Qin Y, Park H-J, Kernan K, Canna S, Berg R, Wessel D, Pollack M, Meert K, Hall M, Newth C, Lin J, Doctor A, Shanley T, Cornell T, Harrison R, Zuppa A, Reeder R, Sward K, Holubkov R, Notterman D, Dean M, Carcillo J, Eunice Kennedy Shriver National Institute of Child Health and Human Development Collaborative Pediatric Critical Care Research Network. Mortality Risk in Pediatric Sepsis Based on C-reactive Protein and Ferritin Levels. Pediatr Crit Care Med. 2022;23(12):968–979. PMCID: PMC9722561 Reference Link
1.Morgan R, Wolfe H, Reeder R, Alvey J, Frazier A, Friess S, Maa T, McQuillen P, Meert K, Nadkarni V, Sharron M, Siems A, Yates A, Ahmed T, Bell M, Bishop R, Bochkoris M, Burns C, Carcillo J, Carpenter T, Dean M, Diddle W, Federman M, Fernandez R, Fink E, Franzon D, Hall M, Hehir D, Horvat C, Huard L, Manga A, Mourani P, Naim M, Notterman D, Pollack M, Sapru A, Schneiter C, Srivastava N, Tabbutt S, Tilford B, Viteri S, Wessel D, Zuppa A, Berg R, Sutton R. The Temporal Association of the COVID-19 Pandemic and Pediatric Cardiopulmonary Resuscitation Quality and Outcomes. Pediatr Crit Care Med. 2022;23(11):908–918. PMCID: PMC9624237 Reference Link
1.Suzuki S, Geri J, Knutson S, Bell-Temin H, Tamura T, Fernández D, Lovett G, Till N, Heller B, Guo J, MacMillan D, Ploss A. Photochemical Identification of Auxiliary Severe Acute Respiratory Syndrome Coronavirus 2 Host Entry Factors Using μMap. J Am Chem Soc. 2022;144(36):16604–16611. PMCID: PMC9469761 Reference Link
1.Lizewski R, Sealfon R, Park S, Smith G, Porter C, Gonzalez-Reiche A, Ge Y, Miller C, Goforth C, Pincas H, Termini M, Ramos I, Nair V, Lizewski S, Alshammary H, Cer R, Chen H, George M-C, Arnold C, Glang L, Long K, Malagon F, Marayag J, Nunez E, Rice G, Ana E, Schilling M, Smith D, Sugiharto V, Sun P, van de Guchte A, Khan Z, Dutta J, Vangeti S, Voegtly L, Weir D, Metcalf J, Troyanskaya O, Bishop-Lilly K, Grenfell B, van Bakel H, Letizia A, Sealfon S. SARS-CoV-2 Outbreak Dynamics in an Isolated US Military Recruit Training Center With Rigorous Prevention Measures. Epidemiology. 2022;33(6):797–807. PMCID: PMC9531985 Reference Link
1.Arizti-Sanz J, Bradley A, Zhang Y, Boehm C, Freije C, Grunberg M, Kosoko-Thoroddsen T-S, Welch N, Pillai P, Mantena S, Kim G, Uwanibe J, John O, Eromon P, Kocher G, Gross R, Lee J, Hensley L, MacInnis B, Johnson J, Springer M, Happi C, Sabeti P, Myhrvold C. Simplified Cas13-based assays for the fast identification of SARS-CoV-2 and its variants. Nat Biomed Eng. 2022;6(8):932–943. PMCID: PMC9398993 Reference Link
1.Soares-Schanoski A, Sauerwald N, Goforth C, Periasamy S, Weir D, Lizewski S, Lizewski R, Ge Y, Kuzmina N, Nair V, Vangeti S, Marjanovic N, Cappuccio A, Cheng W, Mofsowitz S, Miller C, Yu X, George M-C, Zaslavsky E, Bukreyev A, Troyanskaya O, Sealfon S, Letizia A, Ramos I. Asymptomatic SARS-CoV-2 Infection Is Associated With Higher Levels of Serum IL-17C, Matrix Metalloproteinase 10 and Fibroblast Growth Factors Than Mild Symptomatic COVID-19. Front Immunol. 2022;13:821730. PMCID: PMC9037090 Reference Link
1.Kenney D, O’Connell A, Turcinovic J, Montanaro P, Hekman R, Tamura T, Berneshawi A, Cafiero T, Abdullatif S, Blum B, Goldstein S, Heller B, Gertje H, Bullitt E, Trachtenberg A, Chavez E, Nono E, Morrison C, Tseng A, Sheikh A, Kurnick S, Grosz K, Bosmann M, Ericsson M, Huber B, Saeed M, Balazs A, Francis K, Klose A, Paragas N, Campbell J, Connor J, Emili A, Crossland N, Ploss A, Douam F. Humanized mice reveal a macrophage-enriched gene signature defining human lung tissue protection during SARS-CoV-2 infection. Cell Rep. 2022;39(3):110714. PMCID: PMC8977517 Reference Link
1.Welch N, Zhu M, Hua C, Weller J, Mirhashemi M, Nguyen T, Mantena S, Bauer M, Shaw B, Ackerman C, Thakku S, Tse M, Kehe J, Uwera M-M, Eversley J, Bielwaski D, McGrath G, Braidt J, Johnson J, Cerrato F, Moreno G, Krasilnikova L, Petros B, Gionet G, King E, Huard R, Jalbert S, Cleary M, Fitzgerald N, Gabriel S, Gallagher G, Smole S, Madoff L, Brown C, Keller M, Wilson M, Kirby M, Barnes J, Park D, Siddle K, Happi C, Hung D, Springer M, MacInnis B, Lemieux J, Rosenberg E, Branda J, Blainey P, Sabeti P, Myhrvold C. Multiplexed CRISPR-based microfluidic platform for clinical testing of respiratory viruses and identification of SARS-CoV-2 variants. Nat Med. 2022;28(5):1083–1094. PMCID: PMC9117129 Reference Link
1.Mulligan K, Zheng D, Marin B, Do M, Tucker D, Igbinoba Z, Notterman D. COVID-19 and EVALI: Considerations regarding two concurrent public health crises. Am J Emerg Med. 2022;56:389–390. PMCID: PMC8641405 Reference Link
1.King S, Singh M. Comparative genomic analysis reveals varying levels of mammalian adaptation to coronavirus infections. PLoS Comput Biol. 2021;17(11):e1009560. PMCID: PMC8601562 Reference Link
1.Meyer M, Wang Y, Edwards D, Smith G, Rubenstein A, Ramanathan P, Mire C, Pietzsch C, Chen X, Ge Y, Cheng W, Henry C, Woods A, Ma L, Stewart-Jones G, Bock K, Minai M, Nagata B, Periasamy S, Shi P-Y, Graham B, Moore I, Ramos I, Troyanskaya O, Zaslavsky E, Carfi A, Sealfon S, Bukreyev A. Attenuated activation of pulmonary immune cells in mRNA-1273-vaccinated hamsters after SARS-CoV-2 infection. J Clin Invest. 2021;131(20). PMCID: PMC8516449 Reference Link
1.Xydakis M, Albers M, Holbrook E, Lyon D, Shih R, Frasnelli J, Pagenstecher A, Kupke A, Enquist L, Perlman S. Post-viral effects of COVID-19 in the olfactory system and their implications. Lancet Neurol. 2021;20(9):753–761. PMCID: PMC8324113 Reference Link
1.Sanders D, Jumper C, Ackerman P, Bracha D, Donlic A, Kim H, Kenney D, Castello-Serrano I, Suzuki S, Tamura T, Tavares A, Saeed M, Holehouse A, Ploss A, Levental I, Douam F, Padera R, Levy B, Brangwynne C. SARS-CoV-2 requires cholesterol for viral entry and pathological syncytia formation. Elife. 2021;10. PMCID: PMC8104966 Reference Link
1.Iserman C, Roden C, Boerneke M, Sealfon R, McLaughlin G, Jungreis I, Fritch E, Hou Y, Ekena J, Weidmann C, Theesfeld C, Kellis M, Troyanskaya O, Baric R, Sheahan T, Weeks K, Gladfelter A. Genomic RNA Elements Drive Phase Separation of the SARS-CoV-2 Nucleocapsid. Mol Cell. 2020;80(6):1078–1091.e6. PMCID: PMC7691212 Reference Link
1.Letizia A, Ramos I, Obla A, Goforth C, Weir D, Ge Y, Bamman M, Dutta J, Ellis E, Estrella L, George M-C, Gonzalez-Reiche A, Graham W, van de Guchte A, Gutierrez R, Jones F, Kalomoiri A, Lizewski R, Lizewski S, Marayag J, Marjanovic N, Millar E, Nair V, Nudelman G, Nunez E, Pike B, Porter C, Regeimbal J, Rirak S, Ana E, Sealfon R, Sebra R, Simons M, Soares-Schanoski A, Sugiharto V, Termini M, Vangeti S, Williams C, Troyanskaya O, van Bakel H, Sealfon S. SARS-CoV-2 Transmission among Marine Recruits during Quarantine. N Engl J Med. 2020;383(25):2407–2416. PMCID: PMC7675690 Reference Link
1.Menon R, Otto E, Sealfon R, Nair V, Wong A, Theesfeld C, Chen X, Wang Y, Boppana A, Luo J, Yang Y, Kasson P, Schaub J, Berthier C, Eddy S, Lienczewski C, Godfrey B, Dagenais S, Sohaney R, Hartman J, Fermin D, Subramanian L, Looker H, Harder J, Mariani L, Hodgin J, Sexton J, Wobus C, Naik A, Nelson R, Troyanskaya O, Kretzler M. SARS-CoV-2 receptor networks in diabetic and COVID-19-associated kidney disease. Kidney Int. 2020;98(6):1502–1518. PMCID: PMC7543950 Reference Link
1.Abkarian M, Mendez S, Xue N, Yang F, Stone H. Speech can produce jet-like transport relevant to asymptomatic spreading of virus. Proc Natl Acad Sci U S A. 2020;117(41):25237–25245. PMCID: PMC7568291 Reference Link
1.Schloss P, Junior M, Alvania R, Arias C, Baumler A, Casadevall A, Detweiler C, Drake H, Gilbert J, Imperiale M, Lovett S, Maloy S, McAdam A, Newton I, Sadowsky M, Sandri-Goldin R, Silhavy T, Tontonoz P, Young J-A, Cameron C, Cann I, Fuller O, Kozik A. The ASM Journals Committee Values the Contributions of Black Microbiologists. Microbiol Spectr. 2020;8(3). PMID: 32737963 Reference Link
1.DiMaio D, Enquist L, Dermody T. A New Coronavirus Emerges, This Time Causing a Pandemic. Annu Rev Virol. 2020;7(1):iii-v. PMID: 32315256 Reference Link