Zhao Z, Weiss L, McBride C. Two-Photon Calcium Imaging in the Brain of Mosquitoes. Cold Spring Harb Protoc. 2023;2023(3):pdb.prot108070. PMID: 36446529

Zhao Z, Zung J, Hinze A, Kriete A, Iqbal A, Younger M, Matthews B, Merhof D, Thiberge S, Ignell R, Strauch M, McBride C. Mosquito brains encode unique features of human odour to drive host seeking. Nature. 2022;605(7911):706–712. PMCID: PMC9725754

Pisano T, Hoag A, Dhanerawala Z, Guariglia S, Jung C, Boele H-J, Seagraves K, Verpeut J, Wang S. Automated high-throughput mouse transsynaptic viral tracing using iDISCO+ tissue clearing, light-sheet microscopy, and BrainPipe. STAR Protoc. 2022;3(2):101289. PMCID: PMC9038781

Wang Y, McKenzie-Smith G, Liu W, Cho H, Pereira T, Dhanerawala Z, Shaevitz J, Kocher S. Isolation disrupts social interactions and destabilizes brain development in bumblebees. Curr Biol. 2022;32(12):2754–2764.e5. PMCID: PMC9233014

Wang L, Xing X, Zeng X, Jackson R, TeSlaa T, Al-Dalahmah O, Samarah L, Goodwin K, Yang L, McReynolds M, Li X, Wolff J, Rabinowitz J, Davidson S. Spatially resolved isotope tracing reveals tissue metabolic activity. Nat Methods. 2022;19(2):223–230. PMID: 35132243

Hallinen K, Dempsey R, Scholz M, Yu X, Linder A, Randi F, Sharma A, Shaevitz J, Leifer A. Decoding locomotion from population neural activity in moving . Elife. 2021;10. PMCID: PMC8439659

Zhao Z, McBride C. Evolution of olfactory circuits in insects. J Comp Physiol A Neuroethol Sens Neural Behav Physiol. 2020;206(3):353–367. PMCID: PMC7192870

Xydakis M, Albers M, Holbrook E, Lyon D, Shih R, Frasnelli J, Pagenstecher A, Kupke A, Enquist L, Perlman S. Post-viral effects of COVID-19 in the olfactory system and their implications. Lancet Neurol. 2021;20(9):753–761. PMCID: PMC8324113

Pereira T, Shaevitz J, Murthy M. Quantifying behavior to understand the brain. Nat Neurosci. 2020;23(12):1537–1549. PMCID: PMC7780298

Ledo J, Zhang R, Mesin L, Mourão-Sá D, Azevedo E, Troyanskaya O, Bustos V, Greengard P. Lack of a site-specific phosphorylation of Presenilin 1 disrupts microglial gene networks and progenitors during development. PLoS One. 2020;15(8):e0237773. PMCID: PMC7444478

Alfaro-Aco R, Thawani A, Petry S. Biochemical reconstitution of branching microtubule nucleation. Elife. 2020;9. PMCID: PMC6959992

Liu Q, Johnson E, Lam R, Wang Q, Ye H, Wilson E, Minhas P, Liu L, Swarovski M, Tran S, Wang J, Mehta S, Yang X, Rabinowitz J, Yang S, Shamloo M, Mueller C, James M, Andreasson K. Peripheral TREM1 responses to brain and intestinal immunogens amplify stroke severity. Nat Immunol. 2019;20(8):1023–1034. PMCID: PMC6778967

Giovannucci A, Friedrich J, Gunn P, Kalfon J, Brown B, Koay S, Taxidis J, Najafi F, Gauthier J, Zhou P, Khakh B, Tank D, Chklovskii D, Pnevmatikakis E. CaImAn an open source tool for scalable calcium imaging data analysis. Elife. 2019;8. PMCID: PMC6342523

Federspiel J, Greco T, Lum K, Cristea I. Hdac4 Interactions in Huntington’s Disease Viewed Through the Prism of Multiomics. Mol Cell Proteomics. 2019;18(8 suppl 1):S92-S113. PMCID: PMC6692770

Liu M, Sharma A, Shaevitz J, Leifer A. Temporal processing and context dependency in response to mechanosensation. Elife. 2018;7. PMCID: PMC6054533

Yan R, Zhang J, Park H-J, Park E, Oh S, Zheng H, Junn E, Voronkov M, Stock J, Mouradian M. Synergistic neuroprotection by coffee components eicosanoyl-5-hydroxytryptamide and caffeine in models of Parkinson’s disease and DLB. Proc Natl Acad Sci U S A. 2018;115(51):E12053-E12062. PMCID: PMC6304960

Hogue I, Card P, Rinaman L, Goraczniak H, Enquist L. Characterization of the neuroinvasive profile of a pseudorabies virus recombinant expressing the mTurquoise2 reporter in single and multiple injection experiments. J Neurosci Methods. 2018;308:228–239. PMCID: PMC6294127

Cande J, Namiki S, Qiu J, Korff W, Card G, Shaevitz J, Stern D, Berman G. Optogenetic dissection of descending behavioral control in . Elife. 2018;7. PMCID: PMC6031430

Rodan L, Qi W, Ducker G, Demirbas D, Laine R, Yang E, Walker M, Eichler F, Rabinowitz J, Anselm I, Berry G, Undiagnosed Diseases Network (UDN). 5,10-methenyltetrahydrofolate synthetase deficiency causes a neurometabolic disorder associated with microcephaly, epilepsy, and cerebral hypomyelination. Mol Genet Metab. 2018;125(1-2):118–126. PMCID: PMC6557438

Shen M, Kang Y. pSTAT3 Reactive Astrocytes Promote Brain Metastasis. Trends Mol Med. 2018;24(9):733–735. PMID: 30029985

McKee S, Zhang S, Chen L, Rabinowitz J, Reyes T. Perinatal high fat diet and early life methyl donor supplementation alter one carbon metabolism and DNA methylation in the brain. J Neurochem. 2018;145(5):362–373. PMCID: PMC6288810

Park H-J, Lee K-W, Oh S, Yan R, Zhang J, Beach T, Adler C, Voronkov M, Braithwaite S, Stock J, Mouradian M. Protein Phosphatase 2A and Its Methylation Modulating Enzymes LCMT-1 and PME-1 Are Dysregulated in Tauopathies of Progressive Supranuclear Palsy and Alzheimer Disease. J Neuropathol Exp Neurol. 2018;77(2):139–148. PMCID: PMC6251692

Berg R, Sutton R, Reeder R, Berger J, Newth C, Carcillo J, McQuillen P, Meert K, Yates A, Harrison R, Moler F, Pollack M, Carpenter T, Wessel D, Jenkins T, Notterman D, Holubkov R, Tamburro R, Dean M, Nadkarni V, Eunice Kennedy Shriver National Institute of Child Health and Human Development Collaborative Pediatric Critical Care Research Network (CPCCRN) PICqCPR (Pediatric Intensive Care Quality of Cardio-Pulmonary Resuscitation) Investigators. Association Between Diastolic Blood Pressure During Pediatric In-Hospital Cardiopulmonary Resuscitation and Survival. Circulation. 2018;137(17):1784–1795. PMCID: PMC5916041

Hui S, Ghergurovich J, Morscher R, Jang C, Teng X, Lu W, Esparza L, Reya T, Guo J, White E, Rabinowitz J. Glucose feeds the TCA cycle via circulating lactate. Nature. 2017;551(7678):115–118. PMCID: PMC5898814

Nguyen J, Linder A, Plummer G, Shaevitz J, Leifer A. Automatically tracking neurons in a moving and deforming brain. PLoS Comput Biol. 2017;13(5):e1005517. PMCID: PMC5436637

Rosario W, Singh I, Wautlet A, Patterson C, Flak J, Becker T, Ali A, Tamarina N, Philipson L, Enquist L, Myers M, Rhodes C. The Brain-to-Pancreatic Islet Neuronal Map Reveals Differential Glucose Regulation From Distinct Hypothalamic Regions. Diabetes. 2016;65(9):2711–23. PMCID: PMC5001176

Matthews B, McBride C, DeGennaro M, Despo O, Vosshall L. The neurotranscriptome of the Aedes aegypti mosquito. BMC Genomics. 2016;17:32. PMCID: PMC4704297

Chacon M, Boulanger L. MHC class I protein is expressed by neurons and neural progenitors in mid-gestation mouse brain. Mol Cell Neurosci. 2013;52:117–27. PMID: 23147111

Kim C, Miri A, Leung L, Berndt A, Mourrain P, Tank D, Burdine R. Prolonged, brain-wide expression of nuclear-localized GCaMP3 for functional circuit mapping. Front Neural Circuits. 2014;8:138. PMCID: PMC4244806

Tkačik G, Mora T, Marre O, Amodei D, Palmer S, Berry M, Bialek W. Thermodynamics and signatures of criticality in a network of neurons. Proc Natl Acad Sci U S A. 2015;112(37):11508–13. PMCID: PMC4577210

Hopfield J, Brody C. What is a moment? Transient synchrony as a collective mechanism for spatiotemporal integration. Proc Natl Acad Sci U S A. 2001;98(3):1282–7. PMCID: PMC14746

Kopec C, Brody C. Human performance on the temporal bisection task. Brain Cogn. 2010;74(3):262–72. PMCID: PMC3034315

Kopec C, Bowers A, Pai S, Brody C. Semi-automated atlas-based analysis of brain histological sections. J Neurosci Methods. 2011;196(1):12–9. PMCID: PMC3075115

Tootoonian S, Coen P, Kawai R, Murthy M. Neural representations of courtship song in the Drosophila brain. J Neurosci. 2012;32(3):787–98. PMCID: PMC3520490