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Animals

  • 1.
    Treen N, Chavarria E, Weaver C, Brangwynne C, Levine M. An FGF timer for zygotic genome activation. Genes Dev. 2023;37(3-4):80–85. PMCID: PMC10069452
    Reference Link
  • 1.
    King S, Singh M. Primate protein-ligand interfaces exhibit significant conservation and unveil human-specific evolutionary drivers. PLoS Comput Biol. 2023;19(3):e1010966. PMCID: PMC10035887
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  • 1.
    Son J, Du W, Esposito M, Shariati K, Ding H, Kang Y, Accili D. Genetic and pharmacologic inhibition of ALDH1A3 as a treatment of β-cell failure. Nat Commun. 2023;14(1):558. PMCID: PMC9895451
    Reference Link
  • 1.
    Bartman C, Weilandt D, Shen Y, Lee W, Han Y, TeSlaa T, Jankowski C, Samarah L, Park N, da Silva-Diz V, Aleksandrova M, Gultekin Y, Marishta A, Wang L, Yang L, Roichman A, Bhatt V, Lan T, Hu Z, Xing X, Lu W, Davidson S, Wühr M, Heiden M, Herranz D, Guo J, Kang Y, Rabinowitz J. Slow TCA flux and ATP production in primary solid tumours but not metastases. Nature. 2023;614(7947):349–357. PMID: 36725930
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  • 1.
    von Holdt B, Kartzinel R, van Oers K, Verhoeven K, Ouyang J. Changes in the rearing environment cause reorganization of molecular networks associated with DNA methylation. J Anim Ecol. 2023;92(3):648–664. PMID: 36567635
    Reference Link
  • 1.
    Fikrig K, Rose N, Burkett-Cadena N, Kamgang B, Leisnham P, Mangan J, Ponlawat A, Rothman S, Stenn T, McBride C, Harrington L. Aedes albopictus host odor preference does not drive observed variation in feeding patterns across field populations. Sci Rep. 2023;13(1):130. PMCID: PMC9813369
    Reference Link
  • 1.
    Colonnetta M, Schedl P, Deshpande G. Germline/soma distinction in embryos requires regulators of zygotic genome activation. Elife. 2023;12. PMCID: PMC9812407
    Reference Link
  • 1.
    Zhao Z, Weiss L, McBride C. Two-Photon Calcium Imaging in the Brain of Mosquitoes. Cold Spring Harb Protoc. 2023;2023(3):pdb.prot108070. PMID: 36446529
    Reference Link
  • 1.
    Zhao Z, Weiss L, McBride C. GCaMP Imaging in Mosquitoes: Central Nervous System. Cold Spring Harb Protoc. 2023;2023(3):pdb.top107682. PMID: 36446531
    Reference Link
  • 1.
    Lu J, Hamblen E, Brenner L, King J, vonHoldt B, DeCandia A. Ear mite infection restructures otic microbial networks in conservation-reliant Santa Catalina Island foxes (Urocyon littoralis catalinae). Mol Ecol. 2023;32(4):892–903. PMID: 36435981
    Reference Link
  • 1.
    Douam F, Ploss A. A humanized "new-trophil" mouse to study early inflammatory processes. Proc Natl Acad Sci U S A. 2022;119(49):e2216699119. PMCID: PMC9894160
    Reference Link
  • 1.
    Chellappa K, McReynolds M, Lu W, Zeng X, Makarov M, Hayat F, Mukherjee S, Bhat Y, Lingala S, Shima R, Descamps H, Cox T, Ji L, Jankowski C, Chu Q, Davidson S, Thaiss C, Migaud M, Rabinowitz J, Baur J. NAD precursors cycle between host tissues and the gut microbiome. Cell Metab. 2022;34(12):1947–1959.e5. PMCID: PMC9825113
    Reference Link
  • 1.
    Rale M, Romer B, Mahon B, Travis S, Petry S. The conserved centrosomin motif, γTuNA, forms a dimer that directly activates microtubule nucleation by the γ-tubulin ring complex (γTuRC). Elife. 2022;11. PMCID: PMC9859039
    Reference Link
  • 1.
    Rossine F, Vercelli G, Tarnita C, Gregor T. Structured foraging of soil predators unveils functional responses to bacterial defenses. Proc Natl Acad Sci U S A. 2022;119(52):e2210995119. PMCID: PMC9907142
    Reference Link
  • 1.
    Arich S, Haba Y, Assaid N, Fritz M, McBride C, Weill M, Taki H, Sarih M, Labbé P. No association between habitat, autogeny and genetics in Moroccan Culex pipiens populations. Parasit Vectors. 2022;15(1):405. PMCID: PMC9635193
    Reference Link
  • 1.
    Zhao H, Teng D, Yang L, Xu X, Chen J, Jiang T, Feng A, Zhang Y, Frederick D, Gu L, Cai L, Asara J, di Magliano M, Boland G, Flaherty K, Swanson K, Liu D, Rabinowitz J, Zheng B. Myeloid-derived itaconate suppresses cytotoxic CD8 T cells and promotes tumour growth. Nat Metab. 2022;4(12):1660–1673. PMID: 36376563
    Reference Link
  • 1.
    Barnes T, Karlin M, vonHoldt B, Adams J, Waits L, Hinton J, Henderson J, Brzeski K. Genetic diversity and family groups detected in a coyote population with red wolf ancestry on Galveston Island, Texas. BMC Ecol Evol. 2022;22(1):134. PMCID: PMC9664737
    Reference Link
  • 1.
    Rose N, Dabo S, Leal S, Sylla M, Diagne C, Faye O, Faye O, Sall A, McBride C, Lambrechts L. Enhanced mosquito vectorial capacity underlies the Cape Verde Zika epidemic. PLoS Biol. 2022;20(10):e3001864. PMCID: PMC9604947
    Reference Link
  • 1.
    Paramore S, Goodwin K, Nelson C. How to build an epithelial tree. Phys Biol. 2022;19(6). PMID: 36317265
    Reference Link
  • 1.
    Cubaynes S, Brandell E, Stahler D, Smith D, Almberg E, Schindler S, Wayne R, Dobson A, vonHoldt B, MacNulty D, Cross P, Hudson P, Coulson T. Disease outbreaks select for mate choice and coat color in wolves. Science. 2022;378(6617):300–303. PMID: 36264784
    Reference Link
  • 1.
    Cota V, Sohrabi S, Kaletsky R, Murphy C. Oocyte mitophagy is critical for extended reproductive longevity. PLoS Genet. 2022;18(9):e1010400. PMCID: PMC9524673
    Reference Link
  • 1.
    Lukasak B, Mitchener M, Kong L, Dul B, Lazarus C, Ramakrishnan A, Ni J, Shen L, Maze I, Muir T. TGM2-mediated histone transglutamination is dictated by steric accessibility. Proc Natl Acad Sci U S A. 2022;119(43):e2208672119. PMCID: PMC9618071
    Reference Link
  • 1.
    Li H, Gavis E. Drosophila FMRP controls miR-276-mediated regulation of nejire mRNA for space-filling dendrite development. G3 (Bethesda). 2022;12(11). PMCID: PMC9635640
    Reference Link
  • 1.
    Cheng K, Burdine R, Dickinson M, Ekker S, Lin A, Lloyd K, Lutz C, MacRae C, Morrison J, O’Connor D, Postlethwait J, Rogers C, Sanchez S, Simpson J, Talbot W, Wallace D, Weimer J, Bellen H. Promoting validation and cross-phylogenetic integration in model organism research. Dis Model Mech. 2022;15(9). PMCID: PMC9531892
    Reference Link
  • 1.
    Caragiulo A, Gaughran S, Duncan N, Nagy C, Weckel M, vonHoldt B. Coyotes in New York City Carry Variable Genomic Dog Ancestry and Influence Their Interactions with Humans. Genes (Basel). 2022;13(9). PMCID: PMC9498729
    Reference Link
  • 1.
    Taylor I, Murray-Nerger L, Greco T, Liu D, Cristea I, Bassler B. Protein Interaction Networks of Catalytically Active and Catalytically Inactive PqsE in Pseudomonas aeruginosa. mBio. 2022;13(5):e0155922. PMCID: PMC9600345
    Reference Link
  • 1.
    Zeng X, Xing X, Gupta M, Keber F, Lopez J, Lee Y-C, Roichman A, Wang L, Neinast M, Donia M, Wühr M, Jang C, Rabinowitz J. Gut bacterial nutrient preferences quantified in vivo. Cell. 2022;185(18):3441–3456.e19. PMCID: PMC9450212
    Reference Link
  • 1.
    Ibragimov A, Bylino O, Kyrchanova O, Shidlovskii Y, White R, Schedl P, Georgiev P. The Variable CTCF Site from Drosophila melanogaster Ubx Gene is Redundant and Has no Insulator Activity. Dokl Biochem Biophys. 2022;505(1):173–175. PMCID: PMC9613721
    Reference Link
  • 1.
    Jankowski C, Rabinowitz J. Selenium Modulates Cancer Cell Response to Pharmacologic Ascorbate. Cancer Res. 2022;82(19):3486–3498. PMCID: PMC9532358
    Reference Link
  • 1.
    Kennedy M, Greco T, Song B, Cristea I. HTT-OMNI: A Web-based Platform for Huntingtin Interaction Exploration and Multi-omics Data Integration. Mol Cell Proteomics. 2022;21(10):100275. PMCID: PMC9540350
    Reference Link
  • 1.
    Zhang P, Chan M. A multifaceted signal recorder of cellular experiences using Cas12a base-editing. Trends Biotechnol. 2022;40(11):1279–1281. PMID: 35933268
    Reference Link
  • 1.
    Xiao T, Khan A, Shen Y, Chen L, Rabinowitz J. Glucose feeds the tricarboxylic acid cycle via excreted ethanol in fermenting yeast. Nat Chem Biol. 2022;18(12):1380–1387. PMCID: 1082793
    Reference Link
  • 1.
    Taylor I, Jeffrey P, Moustafa D, Goldberg J, Bassler B. The PqsE Active Site as a Target for Small Molecule Antimicrobial Agents against . Biochemistry. 2022;61(17):1894–1903. PMCID: PMC9454246
    Reference Link
  • 1.
    Kikuchi Y, Sugano E, Yuki S, Tabata K, Endo Y, Takita Y, Onoguchi R, Ozaki T, Fukuda T, Takai Y, Kurose T, Tanaka K, Honma Y, Pérez E, Stock M, Fernández J, Tamura M, Voronkov M, Stock J, Tomita H. SIG-1451, a Novel, Non-Steroidal Anti-Inflammatory Compound, Attenuates Light-Induced Photoreceptor Degeneration by Affecting the Inflammatory Process. Int J Mol Sci. 2022;23(15). PMCID: PMC9369167
    Reference Link
  • 1.
    Lim A, Menegatti S, Bustamante J, Le Bourhis L, Allez M, Rogge L, Casanova J-L, Yssel H, Di Santo J. IL-12 drives functional plasticity of human group 2 innate lymphoid cells. J Exp Med. 2016;213(4):569–83. PMCID: PMC4821648
    Reference Link
  • 1.
    Lim A, Verrier T, Vosshenrich C, Di Santo J. Developmental options and functional plasticity of innate lymphoid cells. Curr Opin Immunol. 2017;44:61–68. PMID: 28359987
    Reference Link
  • 1.
    Lim A, Li Y, Lopez-Lastra S, Stadhouders R, Paul F, Casrouge A, Serafini N, Puel A, Bustamante J, Surace L, Masse-Ranson G, David E, Strick-Marchand H, Le Bourhis L, Cocchi R, Topazio D, Graziano P, Muscarella L, Rogge L, Norel X, Sallenave J-M, Allez M, Graf T, Hendriks R, Casanova J-L, Amit I, Yssel H, Di Santo J. Systemic Human ILC Precursors Provide a Substrate for Tissue ILC Differentiation. Cell. 2017;168(6):1086–1100.e10. PMID: 28283063
    Reference Link
  • 1.
    Lim A, McFadden T, Link V, Han S-J, Karlsson R-M, Stacy A, Farley T, Lima-Junior D, Harrison O, Desai J, Lionakis M, Shih H-Y, Cameron H, Belkaid Y. Prenatal maternal infection promotes tissue-specific immunity and inflammation in offspring. Science. 2021;373(6558). PMID: 34446580
    Reference Link
  • 1.
    Voortman L, Anderson C, Urban E, Yuan L, Tran S, Neuhaus-Follini A, Derrick J, Gregor T, Johnston R. Temporally dynamic antagonism between transcription and chromatin compaction controls stochastic photoreceptor specification in flies. Dev Cell. 2022;57(15):1817–1832.e5. PMCID: PMC9378680
    Reference Link
  • 1.
    Devenport D. A squash and a squeeze. Elife. 2022;11. PMCID: PMC9246364
    Reference Link
  • 1.
    Du J, Estrella M, Solorio-Kirpichyan K, Jeffrey P, Korennykh A. Structure of human NADK2 reveals atypical assembly and regulation of NAD kinases from animal mitochondria. Proc Natl Acad Sci U S A. 2022;119(26):e2200923119. PMCID: PMC9245612
    Reference Link
  • 1.
    Seyboldt R, Lavoie J, Henry A, Vanaret J, Petkova M, Gregor T, François P. Latent space of a small genetic network: Geometry of dynamics and information. Proc Natl Acad Sci U S A. 2022;119(26):e2113651119. PMCID: PMC9245618
    Reference Link
  • 1.
    Peng Y, Gavis E. The Drosophila hnRNP F/H homolog Glorund recruits dFMRP to inhibit nanos translation elongation. Nucleic Acids Res. 2022;50(12):7067–7083. PMCID: PMC9262583
    Reference Link
  • 1.
    Biswas S, Rust L, Wettengel J, Yusova S, Fischer M, Carson J, Johnson J, Wei L, Thode T, Kaadige M, Sharma S, Agbaria M, Bimber B, Tu T, Protzer U, Ploss A, Smedley J, Golomb G, Sacha J, Burwitz B. Long-term hepatitis B virus infection of rhesus macaques requires suppression of host immunity. Nat Commun. 2022;13(1):2995. PMCID: PMC9151762
    Reference Link
  • 1.
    Justice J, Cristea I. Nuclear antiviral innate responses at the intersection of DNA sensing and DNA repair. Trends Microbiol. 2022;30(11):1056–1071. PMCID: PMC9560981
    Reference Link
  • 1.
    McFann S, Shvartsman S, Toettcher J. Putting in the Erk: Growth factor signaling and mesoderm morphogenesis. Curr Top Dev Biol. 2022;149:263–310. PMID: 35606058
    Reference Link
  • 1.
    Zhao Z, Zung J, Hinze A, Kriete A, Iqbal A, Younger M, Matthews B, Merhof D, Thiberge S, Ignell R, Strauch M, McBride C. Mosquito brains encode unique features of human odour to drive host seeking. Nature. 2022;605(7911):706–712. PMCID: PMC9725754
    Reference Link
  • 1.
    Rubbi L, Zhang H, Feng J, He C, Kurnia P, Ratan P, Tammana A, House S, Thompson M, Farrell C, Snir S, Stahler D, Ostrander E, vonHoldt B, Pellegrini M. The effects of age, sex, weight, and breed on canid methylomes. Epigenetics. 2022;17(11):1497–1512. PMCID: PMC9586589
    Reference Link
  • 1.
    Pisano T, Hoag A, Dhanerawala Z, Guariglia S, Jung C, Boele H-J, Seagraves K, Verpeut J, Wang S. Automated high-throughput mouse transsynaptic viral tracing using iDISCO+ tissue clearing, light-sheet microscopy, and BrainPipe. STAR Protoc. 2022;3(2):101289. PMCID: PMC9038781
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  • 1.
    Li H, Gavis E. The Drosophila fragile X mental retardation protein modulates the neuronal cytoskeleton to limit dendritic arborization. Development. 2022;149(10). PMID: 35502752
    Reference Link

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