Fixed and live visualization of RNAs in Drosophila oocytes and embryos. Author Evan Abbaszadeh, Elizabeth Gavis Publication Year 2016 Type Journal Article Abstract The ability to visualize RNA in situ is essential to dissect mechanisms for the temporal and spatial regulation of gene expression that drives development. Although considerable attention has been focused on transcriptional control, studies in model organisms like Drosophila have highlighted the importance of post-transcriptional mechanisms - most notably intracellular mRNA localization - in the formation and patterning of the body axes, specification of cell fates, and polarized cell functions. Our understanding of both types of regulation has been greatly advanced by technological innovations that enable a combination of highly quantitative and dynamic analysis of RNA. This review presents two methods, single molecule fluorescence in situ hybridization for high resolution quantitative RNA detection in fixed Drosophila oocytes and embryos and genetically encoded fluorescent RNA labeling for detection in live cells. Keywords Animals, RNA, Messenger, Recombinant Fusion Proteins, Female, Drosophila melanogaster, In Situ Hybridization, Fluorescence, Gene Expression Regulation, Developmental, Embryo, Nonmammalian, Oocytes, Body Patterning, Staining and Labeling, Fixatives, Single Molecule Imaging, Tissue Fixation Journal Methods Volume 98 Pages 34-41 Date Published 2016 Apr 01 ISSN Number 1095-9130 DOI 10.1016/j.ymeth.2016.01.018 Alternate Journal Methods PMCID PMC4808400 PMID 26827935 PubMedPubMed CentralGoogle ScholarBibTeXEndNote X3 XML