Diverse Spatial Expression Patterns Emerge from Unified Kinetics of Transcriptional Bursting. Author Benjamin Zoller, Shawn Little, Thomas Gregor Publication Year 2018 Type Journal Article Abstract How transcriptional bursting relates to gene regulation is a central question that has persisted for more than a decade. Here, we measure nascent transcriptional activity in early Drosophila embryos and characterize the variability in absolute activity levels across expression boundaries. We demonstrate that boundary formation follows a common transcription principle: a single control parameter determines the distribution of transcriptional activity, regardless of gene identity, boundary position, or enhancer-promoter architecture. We infer the underlying bursting kinetics and identify the key regulatory parameter as the fraction of time a gene is in a transcriptionally active state. Unexpectedly, both the rate of polymerase initiation and the switching rates are tightly constrained across all expression levels, predicting synchronous patterning outcomes at all positions in the embryo. These results point to a shared simplicity underlying the apparently complex transcriptional processes of early embryonic patterning and indicate a path to general rules in transcriptional regulation. Keywords Animals, Promoter Regions, Genetic, DNA-Directed RNA Polymerases, Drosophila melanogaster, Models, Theoretical, Gene Expression Regulation, Developmental, Embryo, Nonmammalian, Transcriptional Activation, Body Patterning Journal Cell Volume 175 Issue 3 Pages 835-847.e25 Date Published 2018 Oct 18 ISSN Number 1097-4172 DOI 10.1016/j.cell.2018.09.056 Alternate Journal Cell PMCID PMC6779125 PMID 30340044 PubMedPubMed CentralGoogle ScholarBibTeXEndNote X3 XML