Shim S, Khodaparast S, Lai C-Y, Yan J, Ault J, Rallabandi B, Shardt O, Stone H. CO-Driven diffusiophoresis for maintaining a bacteria-free surface. Soft Matter. 2021;17(9):2568–2576. PMID: 33514979

Wong G, Antani J, Lele P, Chen J, Nan B, Kühn M, Persat A, Bru J-L, Høyland-Kroghsbo N, Siryaporn A, Conrad J, Carrara F, Yawata Y, Stocker R, Brun Y, Whitfield G, Lee C, de Anda J, Schmidt W, Golestanian R, O’Toole G, Floyd K, Yildiz F, Yang S, Jin F, Toyofuku M, Eberl L, Nomura N, Zacharoff L, El-Naggar M, Yalcin S, Malvankar N, Rojas-Andrade M, Hochbaum A, Yan J, Stone H, Wingreen N, Bassler B, Wu Y, Xu H, Drescher K, Dunkel J. Roadmap on emerging concepts in the physical biology of bacterial biofilms: from surface sensing to community formation. Phys Biol. 2021;18(5). PMCID: PMC8506656

Fei C, Mao S, Yan J, Alert R, Stone H, Bassler B, Wingreen N, Košmrlj A. Nonuniform growth and surface friction determine bacterial biofilm morphology on soft substrates. Proc Natl Acad Sci U S A. 2020;117(14):7622–7632. PMCID: PMC7148565

Yan J, Bassler B. Surviving as a Community: Antibiotic Tolerance and Persistence in Bacterial Biofilms. Cell Host Microbe. 2019;26(1):15–21. PMCID: PMC6629468

Beroz F, Yan J, Sabass B, Stone H, Bassler B, Wingreen N, Meir Y. Verticalization of bacterial biofilms. Nat Phys. 2018;14(9):954–960. PMCID: PMC6426328

Yan J, Fei C, Mao S, Moreau A, Wingreen N, Košmrlj A, Stone H, Bassler B. Mechanical instability and interfacial energy drive biofilm morphogenesis. Elife. 2019;8. PMCID: PMC6453567

Yan J, Moreau A, Khodaparast S, Perazzo A, Feng J, Fei C, Mao S, Mukherjee S, Košmrlj A, Wingreen N, Bassler B, Stone H. Bacterial Biofilm Material Properties Enable Removal and Transfer by Capillary Peeling. Adv Mater. 2018;30(46):e1804153. PMCID: PMC8865467

Yan J, Nadell C, Stone H, Wingreen N, Bassler B. Extracellular-matrix-mediated osmotic pressure drives Vibrio cholerae biofilm expansion and cheater exclusion. Nat Commun. 2017;8(1):327. PMCID: PMC5569112

Yan J, Nadell C, Bassler B. Environmental fluctuation governs selection for plasticity in biofilm production. ISME J. 2017;11(7):1569–1577. PMCID: PMC5520152

Feng J, Nunes J, Shin S, Yan J, Kong Y, Prud’homme R, Arnaudov L, Stoyanov S, Stone H. A Scalable Platform for Functional Nanomaterials via Bubble-Bursting. Adv Mater. 2016;28(21):4047–52. PMID: 27007617

Nadell C, Ricaurte D, Yan J, Drescher K, Bassler B. Flow environment and matrix structure interact to determine spatial competition in biofilms. Elife. 2017;6. PMCID: PMC5283829

Yan J, Sharo A, Stone H, Wingreen N, Bassler B. Vibrio cholerae biofilm growth program and architecture revealed by single-cell live imaging. Proc Natl Acad Sci U S A. 2016;113(36):E5337–43. PMCID: PMC5018804