Colonnetta M, Schedl P, Deshpande G. Germline/soma distinction in embryos requires regulators of zygotic genome activation. Elife. 2023;12. PMCID: PMC9812407

Colonnetta M, Goyal Y, Johnson H, Syal S, Schedl P, Deshpande G. Preformation and epigenesis converge to specify primordial germ cell fate in the early Drosophila embryo. PLoS Genet. 2022;18(1):e1010002. PMCID: PMC8765614

Colonnetta M, Abrahante J, Schedl P, Gohl D, Deshpande G. CLAMP regulates zygotic genome activation in Drosophila embryos. Genetics. 2021;219(2). PMCID: PMC8633140

Gilmutdinov R, Kozlov E, Yakovlev K, Olenina L, Kotov A, Barr J, Zhukova M, Schedl P, Shidlovskii Y. The 3’UTR of the Drosophila CPEB translation factor gene orb2 plays a crucial role in spermatogenesis. Development. 2021;148(17). PMCID: PMC8513165

Postika N, Schedl P, Georgiev P, Kyrchanova O. Redundant enhancers in the iab-5 domain cooperatively activate Abd-B in the A5 and A6 abdominal segments of Drosophila. Development. 2021;148(19). PMCID: PMC8497775

Erokhin M, Gorbenko F, Lomaev D, Mazina M, Mikhailova A, Garaev A, Parshikov A, Vorobyeva N, Georgiev P, Schedl P, Chetverina D. Boundaries potentiate polycomb response element-mediated silencing. BMC Biol. 2021;19(1):113. PMCID: PMC8170967

Kozlov E, Shidlovskii Y, Gilmutdinov R, Schedl P, Zhukova M. The role of CPEB family proteins in the nervous system function in the norm and pathology. Cell Biosci. 2021;11(1):64. PMCID: PMC8011179

Shidlovskii Y, Bylino O, Shaposhnikov A, Kachaev Z, Lebedeva L, Kolesnik V, Amendola D, De Simone G, Formicola N, Schedl P, Digilio F, Giordano E. Subunits of the PBAP Chromatin Remodeler Are Capable of Mediating Enhancer-Driven Transcription in . Int J Mol Sci. 2021;22(6). PMCID: PMC7999800

Postika N, Schedl P, Georgiev P, Kyrchanova O. Mapping of functional elements of the Fab-6 boundary involved in the regulation of the Abd-B hox gene in Drosophila melanogaster. Sci Rep. 2021;11(1):4156. PMCID: PMC7892861

Diegmiller R, Zhang L, Gameiro M, Barr J, Alsous J, Schedl P, Shvartsman S, Mischaikow K. Mapping parameter spaces of biological switches. PLoS Comput Biol. 2021;17(2):e1008711. PMCID: PMC7895388

Chetverina D, Erokhin M, Schedl P. GAGA factor: a multifunctional pioneering chromatin protein. Cell Mol Life Sci. 2021;78(9):4125–4141. PMCID: PMC8815297

Colonnetta M, Lym L, Wilkins L, Kappes G, Castro E, Ryder P, Schedl P, Lerit D, Deshpande G. Antagonism between and Torso receptor regulates transcriptional quiescence underlying germline/soma distinction. Elife. 2021;10. PMCID: PMC7843132

Ueberschär M, Wang H, Zhang C, Kondo S, Aoki T, Schedl P, Lai E, Wen J, Dai Q. BEN-solo factors partition active chromatin to ensure proper gene activation in Drosophila. Nat Commun. 2019;10(1):5700. PMCID: PMC6911014

Kyrchanova O, Maksimenko O, Ibragimov A, Sokolov V, Postika N, Lukyanova M, Schedl P, Georgiev P. The insulator functions of the polydactyl C2H2 zinc finger protein CTCF: Necessity versus sufficiency. Sci Adv. 2020;6(13):eaaz3152. PMCID: PMC7096168

Barr J, Gilmutdinov R, Wang L, Shidlovskii Y ii, Schedl P. The CPEB Protein Orb Specifies Oocyte Fate by a 3’UTR-Dependent Autoregulatory Loop. Genetics. 2019;213(4):1431–1446. PMCID: PMC6893371

Kyrchanova O, Wolle D, Sabirov M, Kurbidaeva A, Aoki T, Maksimenko O, Kyrchanova M, Georgiev P, Schedl P. Distinct Elements Confer the Blocking and Bypass Functions of the Bithorax Boundary. Genetics. 2019;213(3):865–876. PMCID: PMC6827379

Estrella M, Du J, Chen L, Rath S, Prangley E, Chitrakar A, Aoki T, Schedl P, Rabinowitz J, Korennykh A. The metabolites NADP and NADPH are the targets of the circadian protein Nocturnin (Curled). Nat Commun. 2019;10(1):2367. PMCID: PMC6542800

Kyrchanova O, Sabirov M, Mogila V, Kurbidaeva A, Postika N, Maksimenko O, Schedl P, Georgiev P. Complete reconstitution of bypass and blocking functions in a minimal artificial insulator from complex. Proc Natl Acad Sci U S A. 2019;116(27):13462–13467. PMCID: PMC6613175

Bialistoky T, Manry D, Smith P, Ng C, Kim Y, Zamir S, Moyal V, Kalifa R, Schedl P, Gerlitz O, Deshpande G. Functional analysis of Niemann-Pick disease type C family protein, NPC1a, in . Development. 2019;146(10). PMCID: PMC6550021

Kachaev Z, Lebedeva L, Shaposhnikov A, Moresco J, Yates J, Schedl P, Shidlovskii Y. Paip2 cooperates with Cbp80 at an active promoter and participates in RNA Polymerase II phosphorylation in Drosophila. FEBS Lett. 2019;593(10):1102–1112. PMCID: PMC6538421

Postika N, Metzler M, Affolter M, Müller M, Schedl P, Georgiev P, Kyrchanova O. Boundaries mediate long-distance interactions between enhancers and promoters in the Drosophila Bithorax complex. PLoS Genet. 2018;14(12):e1007702. PMCID: PMC6306242

Barr J, Charania S, Gilmutdinov R, Yakovlev K, Shidlovskii Y ii, Schedl P. The CPEB translational regulator, Orb, functions together with Par proteins to polarize the Drosophila oocyte. PLoS Genet. 2019;15(3):e1008012. PMCID: PMC6433291

Fedotova A, Clendinen C, Bonchuk A, Mogila V, Aoki T, Georgiev P, Schedl P. Functional dissection of the developmentally restricted BEN domain chromatin boundary factor Insensitive. Epigenetics Chromatin. 2019;12(1):2. PMCID: PMC6317261

Lebedeva L, Yakovlev K, Kozlov E, Schedl P, Deshpande G, Shidlovskii Y. Transcriptional quiescence in primordial germ cells. Crit Rev Biochem Mol Biol. 2018;53(6):579–595. PMCID: PMC8729227

Kachaev Z, Lebedeva L, Kozlov E, Toropygin I, Schedl P, Shidlovskii Y. Paip2 is localized to active promoters and loaded onto nascent mRNA in Drosophila. Cell Cycle. 2018;17(14):1708–1720. PMCID: PMC6133343

Kyrchanova O, Kurbidaeva A, Sabirov M, Postika N, Wolle D, Aoki T, Maksimenko O, Mogila V, Schedl P, Georgiev P. The bithorax complex iab-7 Polycomb response element has a novel role in the functioning of the Fab-7 chromatin boundary. PLoS Genet. 2018;14(8):e1007442. PMCID: PMC6110506

Fedotova A, Aoki T, Rossier M, Mishra R, Clendinen C, Kyrchanova O, Wolle D, Bonchuk A, Maeda R, Mutero A, Cleard F, Mogila V, Karch F, Georgiev P, Schedl P. The BEN Domain Protein Insensitive Binds to the Chromatin Boundary To Establish Proper Segmental Identity in . Genetics. 2018;210(2):573–585. PMCID: PMC6216583

Kaye E, Kurbidaeva A, Wolle D, Aoki T, Schedl P, Larschan E. Drosophila Dosage Compensation Loci Associate with a Boundary-Forming Insulator Complex. Mol Cell Biol. 2017;37(21). PMCID: PMC5640815

Kyrchanova O, Zolotarev N, Mogila V, Maksimenko O, Schedl P, Georgiev P. Architectural protein Pita cooperates with dCTCF in organization of functional boundaries in Bithorax complex. Development. 2017;144(14):2663–2672. PMCID: PMC5536930

Lomaev D, Mikhailova A, Erokhin M, Shaposhnikov A, Moresco J, Blokhina T, Wolle D, Aoki T, Ryabykh V, Yates J, Shidlovskii Y, Georgiev P, Schedl P, Chetverina D. The GAGA factor regulatory network: Identification of GAGA factor associated proteins. PLoS One. 2017;12(3):e0173602. PMCID: PMC5351981

Deshpande G, Barr J, Gerlitz O, Lebedeva L, Shidlovskii Y ii, Schedl P. Cells on the move: Modulation of guidance cues during germ cell migration. Fly (Austin). 2017;11(3):200–207. PMCID: PMC5552272

Bonchuk A, Maksimenko O, Kyrchanova O, Ivlieva T, Mogila V, Deshpande G, Wolle D, Schedl P, Georgiev P. Functional role of dimerization and CP190 interacting domains of CTCF protein in Drosophila melanogaster. BMC Biol. 2015;13:63. PMCID: PMC4528719

Deshpande G, Manry D, Jourjine N, Mogila V, Mozes H, Bialistoky T, Gerlitz O, Schedl P. Role of the ABC transporter Mdr49 in Hedgehog signaling and germ cell migration. Development. 2016;143(12):2111–20. PMCID: PMC4920174

Kyrchanova O, Mogila V, Wolle D, Deshpande G, Parshikov A, Cleard F, Karch F, Schedl P, Georgiev P. Functional Dissection of the Blocking and Bypass Activities of the Fab-8 Boundary in the Drosophila Bithorax Complex. PLoS Genet. 2016;12(7):e1006188. PMCID: PMC4948906

Chetverina D, Fujioka M, Erokhin M, Georgiev P, Jaynes J, Schedl P. Boundaries of loop domains (insulators): Determinants of chromosome form and function in multicellular eukaryotes. Bioessays. 2017;39(3). PMCID: PMC5536339

Lerit D, Shebelut C, Lawlor K, Rusan N, Gavis E, Schedl P, Deshpande G. Germ Cell-less Promotes Centrosome Segregation to Induce Germ Cell Formation. Cell Rep. 2017;18(4):831–839. PMCID: PMC5327791

Cleard F, Wolle D, Taverner A, Aoki T, Deshpande G, Andolfatto P, Karch F, Schedl P. Different Evolutionary Strategies To Conserve Chromatin Boundary Function in the Bithorax Complex. Genetics. 2017;205(2):589–603. PMCID: PMC5289839

Kyrchanova O, Mogila V, Wolle D, Magbanua J, White R, Georgiev P, Schedl P. The boundary paradox in the Bithorax complex. Mech Dev. 2015;138 Pt 2(Pt 2):122–132. PMCID: PMC4890074

Bieli D, Kanca O, Requena D, Hamaratoglu F, Gohl D, Schedl P, Affolter M, Slattery M, Müller M, Estella C. Establishment of a Developmental Compartment Requires Interactions between Three Synergistic Cis-regulatory Modules. PLoS Genet. 2015;11(10):e1005376. PMCID: PMC4607503

Erokhin M, Elizar’ev P, Parshikov A, Schedl P, Georgiev P, Chetverina D. Transcriptional read-through is not sufficient to induce an epigenetic switch in the silencing activity of Polycomb response elements. Proc Natl Acad Sci U S A. 2015;112(48):14930–5. PMCID: PMC4672805

Deshpande G, Nouri A, Schedl P. Wnt Signaling in Sexual Dimorphism. Genetics. 2016;202(2):661–73. PMCID: PMC4788241

Barr J, Yakovlev K, Shidlovskii Y ii, Schedl P. Establishing and maintaining cell polarity with mRNA localization in Drosophila. Bioessays. 2016;38(3):244–53. PMCID: PMC4871591

Fujioka M, Mistry H, Schedl P, Jaynes J. Determinants of Chromosome Architecture: Insulator Pairing in cis and in trans. PLoS Genet. 2016;12(2):e1005889. PMCID: PMC4765946