Hansen J, Sealfon R, Menon R, Eadon M, Lake B, Steck B, Anjani K, Parikh S, Sigdel T, Zhang G, Velickovic D, Barwinska D, Alexandrov T, Dobi D, Rashmi P, Otto E, Rivera M, Rose M, Anderton C, Shapiro J, Pamreddy A, Winfree S, Xiong Y, He Y, de Boer I, Hodgin J, Barisoni L, Naik A, Sharma K, Sarwal M, Zhang K, Himmelfarb J, Rovin B, El-Achkar T, Laszik Z, He J, Dagher P, Valerius T, Jain S, Satlin L, Troyanskaya O, Kretzler M, Iyengar R, Azeloglu E, Kidney Precision Medicine Project. A reference tissue atlas for the human kidney. Sci Adv. 2022;8(23):eabn4965. PMCID: PMC9176741

de Boer I, Alpers C, Azeloglu E, Balis U, Barasch J, Barisoni L, Blank K, Bomback A, Brown K, Dagher P, Dighe A, Eadon M, El-Achkar T, Gaut J, Hacohen N, He Y, Hodgin J, Jain S, Kellum J, Kiryluk K, Knight R, Laszik Z, Lienczewski C, Mariani L, McClelland R, Menez S, Moledina D, Mooney S, O’Toole J, Palevsky P, Parikh C, Poggio E, Rosas S, Rosengart M, Sarwal M, Schaub J, Sedor J, Sharma K, Steck B, Toto R, Troyanskaya O, Tuttle K, Vazquez M, Waikar S, Williams K, Wilson F, Zhang K, Iyengar R, Kretzler M, Himmelfarb J, Kidney Precision Medicine Project. Rationale and design of the Kidney Precision Medicine Project. Kidney Int. 2021;99(3):498–510. PMCID: PMC8330551

El-Achkar T, Eadon M, Menon R, Lake B, Sigdel T, Alexandrov T, Parikh S, Zhang G, Dobi D, Dunn K, Otto E, Anderton C, Carson J, Luo J, Park C, Hamidi H, Zhou J, Hoover P, Schroeder A, Joanes M, Azeloglu E, Sealfon R, Winfree S, Steck B, He Y, D’Agati V, Iyengar R, Troyanskaya O, Barisoni L, Gaut J, Zhang K, Laszik Z, Rovin B, Dagher P, Sharma K, Sarwal M, Hodgin J, Alpers C, Kretzler M, Jain S. A multimodal and integrated approach to interrogate human kidney biopsies with rigor and reproducibility: guidelines from the Kidney Precision Medicine Project. Physiol Genomics. 2021;53(1):1–11. PMCID: PMC7847045

Menon R, Otto E, Sealfon R, Nair V, Wong A, Theesfeld C, Chen X, Wang Y, Boppana A, Luo J, Yang Y, Kasson P, Schaub J, Berthier C, Eddy S, Lienczewski C, Godfrey B, Dagenais S, Sohaney R, Hartman J, Fermin D, Subramanian L, Looker H, Harder J, Mariani L, Hodgin J, Sexton J, Wobus C, Naik A, Nelson R, Troyanskaya O, Kretzler M. SARS-CoV-2 receptor networks in diabetic and COVID-19-associated kidney disease. Kidney Int. 2020;98(6):1502–1518. PMCID: PMC7543950

Menon R, Otto E, Sealfon R, Nair V, Wong A, Theesfeld C, Chen X, Wang Y, Boppanna A, Luo J, Yang Y, Kasson P, Schaub J, Berthier C, Eddy S, Lienczewski C, Godfrey B, Dagenais S, Sohaney R, Hartman J, Fermin D, Subramanian L, Looker H, Harder J, Mariani L, Hodgin J, Sexton J, Wobus C, Naik A, Nelson R, Troyanskaya O, Kretzler M. SARS-CoV-2 receptor networks in diabetic and COVID-19 associated kidney disease. medRxiv. 2020;. PMCID: PMC7241118

Sealfon R, Mariani L, Kretzler M, Troyanskaya O. Machine learning, the kidney, and genotype-phenotype analysis. Kidney Int. 2020;97(6):1141–1149. PMCID: PMC8048707

Menon R, Otto E, Hoover P, Eddy S, Mariani L, Godfrey B, Berthier C, Eichinger F, Subramanian L, Harder J, Ju W, Nair V, Larkina M, Naik A, Luo J, Jain S, Sealfon R, Troyanskaya O, Hacohen N, Hodgin J, Kretzler M, Kpmp K, Nephrotic Syndrome Study Network (NEPTUNE). Single cell transcriptomics identifies focal segmental glomerulosclerosis remission endothelial biomarker. JCI Insight. 2020;5(6). PMCID: PMC7213795

Harder J, Menon R, Otto E, Zhou J, Eddy S, Wys N, O’Connor C, Luo J, Nair V, Cebrian C, Spence J, Bitzer M, Troyanskaya O, Hodgin J, Wiggins R, Freedman B, Kretzler M, European Renal cDNA Bank (ERCB), Nephrotic Syndrome Study Network (NEPTUNE). Organoid single cell profiling identifies a transcriptional signature of glomerular disease. JCI Insight. 2019;4(1). PMCID: PMC6485369