Graduate Publications

26 Publications
Applied Filters: First Letter Of Title: M Reset

M

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Shi C, Runnels A, Murphy C. Mating and male pheromone kill males through distinct mechanisms. Elife. 2017;6. PMCID: PMC5378475
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Rabie E, Zhang S, Kourouklis A, Kilinc N, Simi A, Radisky D, Tien J, Nelson C. Matrix degradation and cell proliferation are coupled to promote invasion and escape from an engineered human breast microtumor. Integr Biol (Camb). 2021;13(1):17–29. PMCID: PMC7856634
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Doubrovinski K, Swan M, Polyakov O, Wieschaus E. Measurement of cortical elasticity in Drosophila melanogaster embryos using ferrofluids. Proc Natl Acad Sci U S A. 2017;114(5):1051–1056. PMCID: PMC5293093
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Overman K, Choi D, Leung K, Shaevitz J, Berman G. Measuring the repertoire of age-related behavioral changes in Drosophila melanogaster. PLoS Comput Biol. 2022;18(2):e1009867. PMCID: PMC8903287
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Song J-G, King M, Zhang R, Kadzik R, Thawani A, Petry S. Mechanism of how augmin directly targets the γ-tubulin ring complex to microtubules. J Cell Biol. 2018;217(7):2417–2428. PMCID: PMC6028527
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Huang X, Duddy O, Silpe J, Paczkowski J, Cong J, Henke B, Bassler B. Mechanism underlying autoinducer recognition in the DPO-VqmA quorum-sensing pathway. J Biol Chem. 2020;295(10):2916–2931. PMCID: PMC7062168
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Duddy O, Huang X, Silpe J, Bassler B. Mechanism underlying the DNA-binding preferences of the Vibrio cholerae and vibriophage VP882 VqmA quorum-sensing receptors. PLoS Genet. 2021;17(7):e1009550. PMCID: PMC8284805
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Valdez V, Neahring L, Petry S, Dumont S. Mechanisms underlying spindle assembly and robustness. Nat Rev Mol Cell Biol. 2023;. PMCID: 5372005
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Cadoff E, Sheffer R, Wientroub S, Ovadia D, Meiner V, Schwarzbauer J. Mechanistic insights into the cellular effects of a novel FN1 variant associated with a spondylometaphyseal dysplasia. Clin Genet. 2018;94(5):429–437. PMCID: PMC6175647
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Smith J, Hall A, Rose M. Membrane curvature directs the localization of Cdc42p to novel foci required for cell-cell fusion. J Cell Biol. 2017;216(12):3971–3980. PMCID: PMC5716282
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Chen L, Lu W, Wang L, Xing X, Chen Z, Teng X, Zeng X, Muscarella A, Shen Y, Cowan A, McReynolds M, Kennedy B, Lato A, Campagna S, Singh M, Rabinowitz J. Metabolite discovery through global annotation of untargeted metabolomics data. Nat Methods. 2021;18(11):1377–1385. PMCID: PMC8733904
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Murray L, Combs A, Rekapalli P, Cristea I. Methods for characterizing protein acetylation during viral infection. Methods Enzymol. 2019;626:587–620. PMCID: PMC6889803
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Nelson C, Gleghorn J, Pang M-F, Jaslove J, Goodwin K, Varner V, Miller E, Radisky D, Stone H. Microfluidic chest cavities reveal that transmural pressure controls the rate of lung development. Development. 2017;144(23):4328–4335. PMCID: PMC5769635
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Miller C, Budoff G, Prenner J, Schwarzbauer J. Minireview: Fibronectin in retinal disease. Exp Biol Med (Maywood). 2017;242(1):1–7. PMCID: PMC5206986
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Federspiel J, Cook K, Kennedy M, Venkatesh S, Otter C, Hofstadter W, Beltran P, Cristea I. Mitochondria and Peroxisome Remodeling across Cytomegalovirus Infection Time Viewed through the Lens of Inter-ViSTA. Cell Rep. 2020;32(4):107943. PMCID: PMC8489195
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Ron-Harel N, Santos D, Ghergurovich J, Sage P, Reddy A, Lovitch S, Dephoure N, Satterstrom K, Sheffer M, Spinelli J, Gygi S, Rabinowitz J, Sharpe A, Haigis M. Mitochondrial Biogenesis and Proteome Remodeling Promote One-Carbon Metabolism for T Cell Activation. Cell Metab. 2016;24(1):104–17. PMCID: PMC5330619
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Betsinger C, Cristea I. Mitochondrial Function, Metabolic Regulation, and Human Disease Viewed through the Prism of Sirtuin 4 (SIRT4) Functions. J Proteome Res. 2019;18(5):1929–1938. PMCID: PMC6889813
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Shrestha R, Little K, Tamayo J, Li W, Perlman D, Devenport D. Mitotic Control of Planar Cell Polarity by Polo-like Kinase 1. Dev Cell. 2015;33(5):522–34. PMCID: PMC4464975
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Wilson M, Wang R, Gitai Z, Seyedsayamdost M. Mode of action and resistance studies unveil new roles for tropodithietic acid as an anticancer agent and the γ-glutamyl cycle as a proton sink. Proc Natl Acad Sci U S A. 2016;113(6):1630–5. PMCID: PMC4760781
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Li Z, Liu B, Li S, King C, Gitai Z, Wingreen N. Modeling microbial metabolic trade-offs in a chemostat. PLoS Comput Biol. 2020;16(8):e1008156. PMCID: PMC7482850
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Grant M, Patterson V, Grimes D, Burdine R. Modeling Syndromic Congenital Heart Defects in Zebrafish. Curr Top Dev Biol. 2017;124:1–40. PMID: 28335857
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Fei C, Wilson A, Mangan N, Wingreen N, Jonikas M. Modelling the pyrenoid-based CO-concentrating mechanism provides insights into its operating principles and a roadmap for its engineering into crops. Nat Plants. 2022;8(5):583–595. PMCID: PMC9122830
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Gaska J, Ding Q, Ploss A. Mouse Models for Studying HCV Vaccines and Therapeutic Antibodies. Methods Mol Biol. 2019;1911:481–503. PMCID: PMC6699619
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Ouzounov N, Nguyen J, Bratton B, Jacobowitz D, Gitai Z, Shaevitz J. MreB Orientation Correlates with Cell Diameter in Escherichia coli. Biophys J. 2016;111(5):1035–43. PMCID: PMC5018124
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Li A, Mao D, Yoshimura A, Rosen P, Martin L, Gallant Étienne, Wühr M, Seyedsayamdost M. Multi-Omic Analyses Provide Links between Low-Dose Antibiotic Treatment and Induction of Secondary Metabolism in Burkholderia thailandensis. mBio. 2020;11(1). PMCID: PMC7042699