Graduate Publications

381 Publications

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Miller C, Budoff G, Prenner J, Schwarzbauer J. Minireview: Fibronectin in retinal disease. Exp Biol Med (Maywood). 2017;242(1):1–7. PMCID: PMC5206986
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Federspiel J, Cook K, Kennedy M, Venkatesh S, Otter C, Hofstadter W, Beltran P, Cristea I. Mitochondria and Peroxisome Remodeling across Cytomegalovirus Infection Time Viewed through the Lens of Inter-ViSTA. Cell Rep. 2020;32(4):107943. PMCID: PMC8489195
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Ron-Harel N, Santos D, Ghergurovich J, Sage P, Reddy A, Lovitch S, Dephoure N, Satterstrom K, Sheffer M, Spinelli J, Gygi S, Rabinowitz J, Sharpe A, Haigis M. Mitochondrial Biogenesis and Proteome Remodeling Promote One-Carbon Metabolism for T Cell Activation. Cell Metab. 2016;24(1):104–17. PMCID: PMC5330619
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Betsinger C, Cristea I. Mitochondrial Function, Metabolic Regulation, and Human Disease Viewed through the Prism of Sirtuin 4 (SIRT4) Functions. J Proteome Res. 2019;18(5):1929–1938. PMCID: PMC6889813
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Shrestha R, Little K, Tamayo J, Li W, Perlman D, Devenport D. Mitotic Control of Planar Cell Polarity by Polo-like Kinase 1. Dev Cell. 2015;33(5):522–34. PMCID: PMC4464975
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Wilson M, Wang R, Gitai Z, Seyedsayamdost M. Mode of action and resistance studies unveil new roles for tropodithietic acid as an anticancer agent and the γ-glutamyl cycle as a proton sink. Proc Natl Acad Sci U S A. 2016;113(6):1630–5. PMCID: PMC4760781
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Li Z, Liu B, Li S, King C, Gitai Z, Wingreen N. Modeling microbial metabolic trade-offs in a chemostat. PLoS Comput Biol. 2020;16(8):e1008156. PMCID: PMC7482850
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Grant M, Patterson V, Grimes D, Burdine R. Modeling Syndromic Congenital Heart Defects in Zebrafish. Curr Top Dev Biol. 2017;124:1–40. PMID: 28335857
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Fei C, Wilson A, Mangan N, Wingreen N, Jonikas M. Modelling the pyrenoid-based CO-concentrating mechanism provides insights into its operating principles and a roadmap for its engineering into crops. Nat Plants. 2022;8(5):583–595. PMCID: PMC9122830
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Gaska J, Ding Q, Ploss A. Mouse Models for Studying HCV Vaccines and Therapeutic Antibodies. Methods Mol Biol. 2019;1911:481–503. PMCID: PMC6699619
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Ouzounov N, Nguyen J, Bratton B, Jacobowitz D, Gitai Z, Shaevitz J. MreB Orientation Correlates with Cell Diameter in Escherichia coli. Biophys J. 2016;111(5):1035–43. PMCID: PMC5018124
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Li A, Mao D, Yoshimura A, Rosen P, Martin L, Gallant Étienne, Wühr M, Seyedsayamdost M. Multi-Omic Analyses Provide Links between Low-Dose Antibiotic Treatment and Induction of Secondary Metabolism in Burkholderia thailandensis. mBio. 2020;11(1). PMCID: PMC7042699
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Garrison C, Singh-Varma A, Pastino A, Steele J, Kohn J, Murthy S, Schwarzbauer J. A multilayered scaffold for regeneration of smooth muscle and connective tissue layers. J Biomed Mater Res A. 2021;109(5):733–744. PMCID: PMC7855544

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Silpe J, Duddy O, Bassler B. Natural and synthetic inhibitors of a phage-encoded quorum-sensing receptor affect phage-host dynamics in mixed bacterial communities. Proc Natl Acad Sci U S A. 2022;119(49):e2217813119. PMCID: PMC9894119
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Stanton A, Goodwin K, Sundarakrishnan A, Jaslove J, Gleghorn J, Pavlovich A, Nelson C. Negative Transpulmonary Pressure Disrupts Airway Morphogenesis by Suppressing Fgf10. Front Cell Dev Biol. 2021;9:725785. PMCID: PMC8673560
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Basta L, Hill-Oliva M, Paramore S, Sharan R, Goh A, Biswas A, Cortez M, Little K, Posfai E, Devenport D. New mouse models for high resolution and live imaging of planar cell polarity proteins in vivo. Development. 2021;148(18). PMCID: PMC8487645
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Sandvik E, Fazen C, Henry T, Mok W, Brynildsen M. Non-Monotonic Survival of Staphylococcus aureus with Respect to Ciprofloxacin Concentration Arises from Prophage-Dependent Killing of Persisters. Pharmaceuticals (Basel). 2015;8(4):778–92. PMCID: PMC4695809
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Celià-Terrassa T, Liu D, Choudhury A, Hang X, Wei Y, Zamalloa J, Alfaro-Aco R, Chakrabarti R, Jiang Y-Z, Koh B, Smith H, DeCoste C, Li J-J, Shao Z-M, Kang Y. Normal and cancerous mammary stem cells evade interferon-induced constraint through the miR-199a-LCOR axis. Nat Cell Biol. 2017;19(6):711–723. PMCID: PMC5481166
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Badura A, Verpeut J, Metzger J, Pereira T, Pisano T, Deverett B, Bakshinskaya D, Wang S. Normal cognitive and social development require posterior cerebellar activity. Elife. 2018;7. PMCID: PMC6195348
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Howard T, Lum K, Kennedy M, Cristea I. The Nuclear DNA Sensor IFI16 Indiscriminately Binds to and Diminishes Accessibility of the HSV-1 Genome to Suppress Infection. mSystems. 2022;7(3):e0019822. PMCID: PMC9239196
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Falahati H, Pelham-Webb B, Blythe S, Wieschaus E. Nucleation by rRNA Dictates the Precision of Nucleolus Assembly. Curr Biol. 2016;26(3):277–85. PMCID: PMC5866055
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Lovett B, Hill K, Randolph E, Wang L, Schwarzbauer J. Nucleation of fibronectin fibril assembly requires binding between heparin and the 13th type III module of fibronectin. J Biol Chem. 2023;299(5):104622. PMID: 36933809

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Cota V, Sohrabi S, Kaletsky R, Murphy C. Oocyte mitophagy is critical for extended reproductive longevity. PLoS Genet. 2022;18(9):e1010400. PMCID: PMC9524673
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Bosse J, Tanneti N, Hogue I, Enquist L. Open LED Illuminator: A Simple and Inexpensive LED Illuminator for Fast Multicolor Particle Tracking in Neurons. PLoS One. 2015;10(11):e0143547. PMCID: PMC4658086
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Gil A, Carrasco-López C, Zhu L, Zhao E, Ravindran P, Wilson M, Goglia A, Avalos J, Toettcher J. Optogenetic control of protein binding using light-switchable nanobodies. Nat Commun. 2020;11(1):4044. PMCID: PMC7426870