381 Publications
Journal Article
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Stanton A, Goodwin K, Sundarakrishnan A, Jaslove J, Gleghorn J, Pavlovich A, Nelson C. Negative Transpulmonary Pressure Disrupts Airway Morphogenesis by Suppressing Fgf10. Front Cell Dev Biol. 2021;9:725785. PMCID: PMC8673560
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Lalwani M, Ip S, Carrasco-López C, Day C, Zhao E, Kawabe H, Avalos J. Optogenetic control of the lac operon for bacterial chemical and protein production. Nat Chem Biol. 2021;17(1):71–79. PMCID: 5876151
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TeSlaa T, Bartman C, Jankowski C, Zhang Z, Xu X, Xing X, Wang L, Lu W, Hui S, Rabinowitz J. The Source of Glycolytic Intermediates in Mammalian Tissues. Cell Metab. 2021;33(2):367–378.e5. PMCID: PMC8088818
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Duddy O, Huang X, Silpe J, Bassler B. Mechanism underlying the DNA-binding preferences of the Vibrio cholerae and vibriophage VP882 VqmA quorum-sensing receptors. PLoS Genet. 2021;17(7):e1009550. PMCID: PMC8284805
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Verma A, Jena S, Isakov D, Aoki K, Toettcher J, Engelhardt B. A self-exciting point process to study multicellular spatial signaling patterns. Proc Natl Acad Sci U S A. 2021;118(32). PMCID: PMC8364135
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Setru S, Gouveia B, Alfaro-Aco R, Shaevitz J, Stone H, Petry S. A hydrodynamic instability drives protein droplet formation on microtubules to nucleate branches. Nat Phys. 2021;17(4):493–498. PMCID: PMC8865447
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Sheng X, Cristea I. The antiviral sirtuin 3 bridges protein acetylation to mitochondrial integrity and metabolism during human cytomegalovirus infection. PLoS Pathog. 2021;17(4):e1009506. PMCID: PMC8078788
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Shim G, Devenport D, Cohen D. Overriding native cell coordination enhances external programming of collective cell migration. Proc Natl Acad Sci U S A. 2021;118(29). PMCID: PMC8307614
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García-Cañaveras J, Lancho O, Ducker G, Ghergurovich J, Xu X, da Silva-Diz V, Minuzzo S, Indraccolo S, Kim H, Herranz D, Rabinowitz J. SHMT inhibition is effective and synergizes with methotrexate in T-cell acute lymphoblastic leukemia. Leukemia. 2021;35(2):377–388. PMCID: PMC7647950
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Garrison C, Singh-Varma A, Pastino A, Steele J, Kohn J, Murthy S, Schwarzbauer J. A multilayered scaffold for regeneration of smooth muscle and connective tissue layers. J Biomed Mater Res A. 2021;109(5):733–744. PMCID: PMC7855544
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Eickhoff M, Fei C, Huang X, Bassler B. LuxT controls specific quorum-sensing-regulated behaviors in Vibrionaceae spp. via repression of qrr1, encoding a small regulatory RNA. PLoS Genet. 2021;17(4):e1009336. PMCID: PMC8043402
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Murray-Nerger L, Cristea I. Lamin post-translational modifications: emerging toggles of nuclear organization and function. Trends Biochem Sci. 2021;46(10):832–847. PMCID: PMC8793286
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Stahley S, Basta L, Sharan R, Devenport D. Celsr1 adhesive interactions mediate the asymmetric organization of planar polarity complexes. Elife. 2021;10. PMCID: PMC7857726
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Li A, Okada B, Rosen P, Seyedsayamdost M. Piperacillin triggers virulence factor biosynthesis via the oxidative stress response in . Proc Natl Acad Sci U S A. 2021;118(26). PMCID: PMC8256049
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Crapse J, Pappireddi N, Gupta M, Shvartsman S, Wieschaus E, Wühr M. Evaluating the Arrhenius equation for developmental processes. Mol Syst Biol. 2021;17(8):e9895. PMCID: PMC8377445
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Colonnetta M, Abrahante J, Schedl P, Gohl D, Deshpande G. CLAMP regulates zygotic genome activation in Drosophila embryos. Genetics. 2021;219(2). PMCID: PMC8633140
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Ghergurovich J, Lang J, Levin M, Briones N, Facista S, Mueller C, Cowan A, McBride M, Rodriguez E, Killian A, Dao T, Lamont J, Barron A, Su X, Hendricks W, Espina V, Von Hoff D, O’Shaughnessy J, Rabinowitz J. Local production of lactate, ribose phosphate, and amino acids within human triple-negative breast cancer. Med. 2021;2(6):736–754. PMCID: PMC8248508
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Scheffler R, Sugimoto Y, Bratton B, Ellison C, Koch M, Donia M, Gitai Z. Pseudomonas aeruginosa detachment from surfaces via a self-made small molecule. J Biol Chem. 2021;296:100279. PMCID: PMC7949062
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Rabie E, Zhang S, Dunn C, Nelson C. Substratum stiffness signals through integrin-linked kinase and β1-integrin to regulate midbody proteins and abscission during EMT. Mol Biol Cell. 2021;32(18):1664–1676. PMCID: PMC8684726
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Miangolarra M, Li S, Joanny J-F, Wingreen N, Castellana M. Steric interactions and out-of-equilibrium processes control the internal organization of bacteria. Proc Natl Acad Sci U S A. 2021;118(43). PMCID: PMC8639350
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Doherty C, Diegmiller R, Kapasiawala M, Gavis E, Shvartsman S. Coupled oscillators coordinate collective germline growth. Dev Cell. 2021;56(6):860–870.e8. PMCID: PMC8265018
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Howard T, Crow M, Greco T, Lum K, Li T, Cristea I. The DNA Sensor IFIX Drives Proteome Alterations To Mobilize Nuclear and Cytoplasmic Antiviral Responses, with Its Acetylation Acting as a Localization Toggle. mSystems. 2021;6(3):e0039721. PMCID: PMC8269231
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Dai W, Li A, Yu N, Nguyen T, Leach R, Wühr M, Kleiner R. Activity-based RNA-modifying enzyme probing reveals DUS3L-mediated dihydrouridylation. Nat Chem Biol. 2021;17(11):1178–1187. PMCID: PMC8551019
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Murugan A, Husain K, Rust M, Hepler C, Bass J, Pietsch J, Swain P, Jena S, Toettcher J, Chakraborty A, Sprenger K, Mora T, Walczak A, Rivoire O, Wang S, Wood K, Skanata A, Kussell E, Ranganathan R, Shih H-Y, Goldenfeld N. Roadmap on biology in time varying environments. Phys Biol. 2021;18(4). PMCID: PMC8652373
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Silver B, Zhang S, Rabie E, Nelson C. Substratum stiffness tunes membrane voltage in mammary epithelial cells. J Cell Sci. 2021;134(13). PMCID: PMC8310660