Date
Apr 16, 2025, 12:00 pm1:00 pm
Audience
Free and open to the university community and the public.

Speakers

Alexander van Oudenaarden
Director and Group Leader
Hubrecht Institute

Details

Event Description

Abstract: In recent years novel single-cell sequencing methods have allowed an in-depth analysis of the diversity of cell types and states in a wide range of organisms. Due to the continuous optimization of experimental and computational methods by many research groups, it is now possible to sequence the transcriptomes of thousands to millions of individual cells. Albeit an exciting development, transcription only covers the first step in the central dogma. The second step, the process of translation, is currently much harder to explore in single cells. Despite recent progress in detecting proteins by mass spectrometry with single-cell resolution, it remains a major challenge to measure translation in individual cells. Building upon existing ribosome profiling protocols our laboratory recently increased the sensitivity of these assays allowing ribosome profiling in single cells. I will present our ongoing efforts to determine translation efficiency in single cells and to correlate translation efficiency to tRNA levels and tRNA modifications. Additionally, I will explore how these approaches could provide insights into ribosome assembly and ribosome structure at the level of an individual cell.

Sponsor
Department of Molecular Biology
Contact
Michelle Chan, Department of Molecular Biology
Event Category
Butler Seminar Series